Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 UNC93B2-201ENST00000285383 730 ntBASIC17.8■□□□□ 0.44
SMSP52788 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.8■□□□□ 0.44
SMSP52788 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMSP52788 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.8■□□□□ 0.44
SMSP52788 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMSP52788 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.8■□□□□ 0.44
SMSP52788 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.8■□□□□ 0.44
SMSP52788 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.8■□□□□ 0.44
SMSP52788 AC092865.7-201ENST00000641832 219 ntBASIC17.8■□□□□ 0.44
SMSP52788 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMSP52788 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMSP52788 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMSP52788 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.79■□□□□ 0.44
SMSP52788 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 AC145285.6-201ENST00000604632 637 ntBASIC17.79■□□□□ 0.44
SMSP52788 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMSP52788 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 AL138781.2-201ENST00000617896 1843 ntBASIC17.79■□□□□ 0.44
SMSP52788 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SMSP52788 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMSP52788 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMSP52788 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMSP52788 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SMSP52788 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.78■□□□□ 0.44
SMSP52788 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.78■□□□□ 0.44
SMSP52788 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.78■□□□□ 0.44
SMSP52788 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.78■□□□□ 0.44
SMSP52788 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.78■□□□□ 0.44
SMSP52788 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.78■□□□□ 0.44
SMSP52788 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
SMSP52788 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMSP52788 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.78■□□□□ 0.44
SMSP52788 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 KRT18P35-201ENST00000510488 1269 ntBASIC17.77■□□□□ 0.44
SMSP52788 NUDT16P1-203ENST00000513809 620 ntBASIC17.77■□□□□ 0.44
SMSP52788 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.77■□□□□ 0.44
SMSP52788 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.77■□□□□ 0.44
SMSP52788 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.77■□□□□ 0.44
SMSP52788 MIR6786-201ENST00000616843 113 ntBASIC17.77■□□□□ 0.44
SMSP52788 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.77■□□□□ 0.44
SMSP52788 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.77■□□□□ 0.44
SMSP52788 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.77■□□□□ 0.44
SMSP52788 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMSP52788 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SMSP52788 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMSP52788 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMSP52788 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMSP52788 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMSP52788 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms