Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZEB1-212ENST00000558655 2773 ntTSL 24.3□□□□□ -1.723e-6■■■□□ 19
MATR3P43243 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.96■■□□□ 1.277e-7■■■□□ 19
MATR3P43243 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.121e-6■■■□□ 19
MATR3P43243 SCFD1-201ENST00000311943 2016 ntTSL 213.19□□□□□ -0.31e-6■■■□□ 19
MATR3P43243 SCFD1-206ENST00000484733 2308 ntTSL 512.48□□□□□ -0.411e-6■■■□□ 19
MATR3P43243 SCFD1-215ENST00000555259 1553 ntTSL 1 (best)10.41□□□□□ -0.741e-6■■■□□ 19
MATR3P43243 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC9.11□□□□□ -0.951e-6■■■□□ 19
MATR3P43243 SCFD1-222ENST00000556768 1829 ntTSL 1 (best)8.03□□□□□ -1.121e-6■■■□□ 19
MATR3P43243 SCFD1-204ENST00000463622 1943 ntTSL 23.81□□□□□ -1.81e-6■■■□□ 19
MATR3P43243 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.68□□□□□ -1.821e-6■■■□□ 19
MATR3P43243 GRB10-212ENST00000439044 733 ntTSL 524.3■■□□□ 1.481e-6■■■□□ 19
MATR3P43243 PTPRK-214ENST00000495748 746 ntTSL 58.44□□□□□ -1.061e-6■■■□□ 19
MATR3P43243 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.032e-6■■■□□ 19
MATR3P43243 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 02e-6■■■□□ 19
MATR3P43243 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC14.15□□□□□ -0.142e-6■■■□□ 19
MATR3P43243 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.292e-6■■■□□ 19
MATR3P43243 PTPRK-216ENST00000524481 3157 ntTSL 212.95□□□□□ -0.342e-6■■■□□ 19
MATR3P43243 PTPRK-217ENST00000524534 2441 ntTSL 512.76□□□□□ -0.372e-6■■■□□ 19
MATR3P43243 PTPRK-205ENST00000368213 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.372e-6■■■□□ 19
MATR3P43243 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.882e-6■■■□□ 19
MATR3P43243 DLEU1-211ENST00000469127 320 ntTSL 58.18□□□□□ -1.17e-7■■■□□ 19
MATR3P43243 PAN3-204ENST00000503791 2443 ntTSL 226.18■■□□□ 1.785e-7■■■□□ 18.9
MATR3P43243 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.77■■□□□ 1.087e-9■■■□□ 18.9
MATR3P43243 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.18■□□□□ 0.827e-9■■■□□ 18.9
MATR3P43243 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.57e-9■■■□□ 18.9
MATR3P43243 WAC-204ENST00000375646 2176 ntTSL 5 BASIC13.63□□□□□ -0.237e-9■■■□□ 18.9
MATR3P43243 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.88□□□□□ -1.477e-9■■■□□ 18.9
MATR3P43243 WAC-208ENST00000424454 1330 ntTSL 25.48□□□□□ -1.537e-9■■■□□ 18.9
MATR3P43243 WAC-210ENST00000439676 2762 ntTSL 55.46□□□□□ -1.547e-9■■■□□ 18.9
MATR3P43243 WAC-201ENST00000345541 4526 ntTSL 1 (best)4.78□□□□□ -1.647e-9■■■□□ 18.9
MATR3P43243 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.697e-9■■■□□ 18.9
MATR3P43243 ATXN1-207ENST00000483954 744 ntTSL 35.83□□□□□ -1.485e-7■■■□□ 18.9
MATR3P43243 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.49□□□□□ -1.855e-7■■■□□ 18.9
MATR3P43243 ATXN1-209ENST00000495178 853 ntTSL 1 (best)2.38□□□□□ -2.035e-7■■■□□ 18.9
MATR3P43243 ZMYND8-214ENST00000467200 3634 ntAPPRIS ALT2 TSL 1 (best)11.06□□□□□ -0.643e-7■■■□□ 18.9
MATR3P43243 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.1■□□□□ 0.812e-6■■■□□ 18.9
MATR3P43243 DAP-205ENST00000510546 780 ntTSL 218.3■□□□□ 0.522e-6■■■□□ 18.9
MATR3P43243 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.462e-6■■■□□ 18.9
MATR3P43243 DAP-203ENST00000508253 785 ntTSL 216.32■□□□□ 0.22e-6■■■□□ 18.9
MATR3P43243 DAP-206ENST00000514882 562 ntTSL 410.41□□□□□ -0.742e-6■■■□□ 18.9
MATR3P43243 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.63□□□□□ -1.831e-6■■■□□ 18.9
MATR3P43243 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.515e-6■■■□□ 18.9
MATR3P43243 SASS6-202ENST00000462159 3972 ntTSL 1 (best)5.26□□□□□ -1.575e-6■■■□□ 18.9
MATR3P43243 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.542e-9■■■□□ 18.9
MATR3P43243 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.752e-9■■■□□ 18.9
MATR3P43243 EFCAB11-207ENST00000555608 644 ntTSL 216.26■□□□□ 0.191e-7■■■□□ 18.9
MATR3P43243 EFCAB11-212ENST00000556639 2326 ntTSL 515.04■□□□□ -01e-7■■■□□ 18.9
MATR3P43243 EFCAB11-203ENST00000550103 647 ntTSL 37.24□□□□□ -1.251e-7■■■□□ 18.9
MATR3P43243 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.069e-7■■■□□ 18.9
MATR3P43243 PPIG-203ENST00000414307 1062 ntTSL 1 (best)16.85■□□□□ 0.297e-7■■■□□ 18.9
MATR3P43243 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC12.33□□□□□ -0.447e-7■■■□□ 18.9
MATR3P43243 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC11.43□□□□□ -0.587e-7■■■□□ 18.9
MATR3P43243 PPIG-211ENST00000530152 690 ntTSL 311.07□□□□□ -0.647e-7■■■□□ 18.9
MATR3P43243 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.57e-7■■■□□ 18.9
MATR3P43243 PPIG-206ENST00000433207 1485 ntTSL 1 (best)4.92□□□□□ -1.627e-7■■■□□ 18.9
MATR3P43243 PPIG-204ENST00000417938 527 ntTSL 54.63□□□□□ -1.677e-7■■■□□ 18.9
MATR3P43243 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.797e-7■■■□□ 18.9
MATR3P43243 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.449e-7■■■□□ 18.9
MATR3P43243 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC10.95□□□□□ -0.669e-7■■■□□ 18.9
MATR3P43243 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC10.42□□□□□ -0.749e-7■■■□□ 18.9
MATR3P43243 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.779e-7■■■□□ 18.9
MATR3P43243 TBCK-206ENST00000467183 3566 ntTSL 1 (best)9.71□□□□□ -0.859e-7■■■□□ 18.9
MATR3P43243 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.439e-7■■■□□ 18.9
MATR3P43243 TBCK-217ENST00000510927 2826 ntTSL 25□□□□□ -1.619e-7■■■□□ 18.9
MATR3P43243 U2AF2-208ENST00000592874 849 ntTSL 518.04■□□□□ 0.483e-11■■■□□ 18.9
MATR3P43243 PHYKPL-211ENST00000494126 2297 ntTSL 1 (best)26.73■■□□□ 1.872e-10■■■□□ 18.9
MATR3P43243 PHYKPL-204ENST00000474052 1539 ntTSL 1 (best)25.27■■□□□ 1.642e-10■■■□□ 18.9
MATR3P43243 PHYKPL-209ENST00000489262 2780 ntTSL 223.37■■□□□ 1.332e-10■■■□□ 18.9
MATR3P43243 PHYKPL-213ENST00000506001 583 ntTSL 320.53■□□□□ 0.882e-10■■■□□ 18.9
MATR3P43243 PHYKPL-210ENST00000493197 1969 ntTSL 220.3■□□□□ 0.842e-10■■■□□ 18.9
MATR3P43243 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.792e-10■■■□□ 18.9
MATR3P43243 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.01□□□□□ -0.172e-6■■■□□ 18.9
MATR3P43243 PHYKPL-202ENST00000323594 739 ntTSL 513.23□□□□□ -0.292e-10■■■□□ 18.9
MATR3P43243 PHYKPL-218ENST00000514424 584 ntTSL 413.23□□□□□ -0.292e-10■■■□□ 18.9
MATR3P43243 PHYKPL-208ENST00000481811 2709 ntTSL 213.23□□□□□ -0.292e-10■■■□□ 18.9
MATR3P43243 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC12.7□□□□□ -0.382e-6■■■□□ 18.9
MATR3P43243 LINC00470-203ENST00000577867 1211 ntTSL 1 (best)12.13□□□□□ -0.472e-6■■■□□ 18.9
MATR3P43243 PHYKPL-216ENST00000510991 814 ntTSL 312.13□□□□□ -0.472e-10■■■□□ 18.9
MATR3P43243 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC10.63□□□□□ -0.712e-6■■■□□ 18.9
MATR3P43243 PHYKPL-217ENST00000511716 562 ntTSL 39.8□□□□□ -0.842e-10■■■□□ 18.9
MATR3P43243 PHYKPL-215ENST00000510913 643 ntTSL 38.98□□□□□ -0.972e-10■■■□□ 18.9
MATR3P43243 LINC00470-204ENST00000578835 674 ntTSL 28.92□□□□□ -0.982e-6■■■□□ 18.9
MATR3P43243 LINC00470-207ENST00000581430 556 ntTSL 57.85□□□□□ -1.152e-6■■■□□ 18.9
MATR3P43243 LINC00470-206ENST00000581212 721 ntTSL 1 (best)4.49□□□□□ -1.692e-6■■■□□ 18.9
MATR3P43243 LINC00470-209ENST00000582862 424 ntTSL 1 (best)3.66□□□□□ -1.822e-6■■■□□ 18.9
MATR3P43243 LINC00470-202ENST00000577403 251 ntTSL 1 (best)2.69□□□□□ -1.982e-6■■■□□ 18.9
MATR3P43243 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.82e-6■■■□□ 18.9
MATR3P43243 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.34□□□□□ -1.392e-6■■■□□ 18.9
MATR3P43243 IGF2BP2-210ENST00000494906 918 ntTSL 59.96□□□□□ -0.823e-7■■■□□ 18.9
MATR3P43243 SEPT2-244ENST00000495463 501 ntTSL 431.02■■■□□ 2.563e-18■■■□□ 18.9
MATR3P43243 PSMA4-212ENST00000559365 786 ntTSL 529.49■■■□□ 2.312e-9■■■□□ 18.9
MATR3P43243 SEPT2-234ENST00000475474 749 ntTSL 228.47■■■□□ 2.153e-18■■■□□ 18.9
MATR3P43243 SEPT2-238ENST00000482304 740 ntTSL 227.53■■■□□ 23e-18■■■□□ 18.9
MATR3P43243 SEPT2-227ENST00000462147 576 ntTSL 426.91■■□□□ 1.93e-18■■■□□ 18.9
MATR3P43243 SEPT2-216ENST00000434955 480 ntTSL 325.11■■□□□ 1.613e-18■■■□□ 18.9
MATR3P43243 ACYP2-205ENST00000458030 1330 ntTSL 325.07■■□□□ 1.62e-9■■■□□ 18.9
MATR3P43243 PSMA4-215ENST00000559934 2741 ntTSL 1 (best)24.44■■□□□ 1.52e-9■■■□□ 18.9
MATR3P43243 TMEM63B-205ENST00000525294 916 ntTSL 224.34■■□□□ 1.492e-9■■■□□ 18.9
MATR3P43243 SEPT2-209ENST00000411484 561 ntTSL 424.17■■□□□ 1.463e-18■■■□□ 18.9
MATR3P43243 SEPT2-217ENST00000436795 775 ntTSL 524.15■■□□□ 1.463e-18■■■□□ 18.9
Retrieved 100 of 16,209 protein–RNA pairs in 93.1 ms