RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
EFCAB11-203ENST00000550103 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
EFCAB11-203ENST00000550103 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
EFCAB11-203ENST00000550103 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
EFCAB11-203ENST00000550103 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
EFCAB11-203ENST00000550103 ADRA2BP18089 450 aa16.87■□□□□ 0.29
EFCAB11-203ENST00000550103 FOXD1Q16676 465 aa16.73■□□□□ 0.27
EFCAB11-203ENST00000550103 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
EFCAB11-203ENST00000550103 KCNA4P22459 653 aa16.58■□□□□ 0.24
EFCAB11-203ENST00000550103 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
EFCAB11-203ENST00000550103 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
EFCAB11-203ENST00000550103 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
EFCAB11-203ENST00000550103 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
EFCAB11-203ENST00000550103 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
EFCAB11-203ENST00000550103 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
EFCAB11-203ENST00000550103 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
EFCAB11-203ENST00000550103 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.08
EFCAB11-203ENST00000550103 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
EFCAB11-203ENST00000550103 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
EFCAB11-203ENST00000550103 ZBTB22O15209 634 aa15.24■□□□□ 0.03
EFCAB11-203ENST00000550103 MSH5O43196 834 aa15.19■□□□□ 0.02
EFCAB11-203ENST00000550103 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
EFCAB11-203ENST00000550103 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
EFCAB11-203ENST00000550103 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
EFCAB11-203ENST00000550103 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
EFCAB11-203ENST00000550103 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
EFCAB11-203ENST00000550103 DMRT2Q9Y5R5 561 aa14.65□□□□□ -0.06
EFCAB11-203ENST00000550103 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
EFCAB11-203ENST00000550103 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
EFCAB11-203ENST00000550103 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
EFCAB11-203ENST00000550103 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
EFCAB11-203ENST00000550103 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
EFCAB11-203ENST00000550103 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
EFCAB11-203ENST00000550103 FKBP8Q14318 412 aa14.3□□□□□ -0.12
EFCAB11-203ENST00000550103 CCDC180Q9P1Z9 1646 aa14.04□□□□□ -0.16
EFCAB11-203ENST00000550103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-203ENST00000550103 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
EFCAB11-203ENST00000550103 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
EFCAB11-203ENST00000550103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
EFCAB11-203ENST00000550103 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
EFCAB11-203ENST00000550103 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
EFCAB11-203ENST00000550103 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
EFCAB11-203ENST00000550103 APLP2Q06481 763 aa13.71□□□□□ -0.21
EFCAB11-203ENST00000550103 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
EFCAB11-203ENST00000550103 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
EFCAB11-203ENST00000550103 ABCC9O60706 1549 aa13.56□□□□□ -0.24
EFCAB11-203ENST00000550103 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
EFCAB11-203ENST00000550103 PROM2Q8N271 834 aa13.45□□□□□ -0.26
EFCAB11-203ENST00000550103 FBLN2P98095 1184 aa13.4□□□□□ -0.26
EFCAB11-203ENST00000550103 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
EFCAB11-203ENST00000550103 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
EFCAB11-203ENST00000550103 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
EFCAB11-203ENST00000550103 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
EFCAB11-203ENST00000550103 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
EFCAB11-203ENST00000550103 POLA2Q14181 598 aa13.22□□□□□ -0.29
EFCAB11-203ENST00000550103 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
EFCAB11-203ENST00000550103 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
EFCAB11-203ENST00000550103 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
EFCAB11-203ENST00000550103 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
EFCAB11-203ENST00000550103 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
EFCAB11-203ENST00000550103 PKD2Q13563 968 aa13.12□□□□□ -0.31
EFCAB11-203ENST00000550103 CAPN15O75808 1086 aa13.1□□□□□ -0.31
EFCAB11-203ENST00000550103 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
EFCAB11-203ENST00000550103 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
EFCAB11-203ENST00000550103 NACADO15069 1562 aa13.05□□□□□ -0.32
EFCAB11-203ENST00000550103 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
EFCAB11-203ENST00000550103 BCANQ96GW7 911 aa13.04□□□□□ -0.32
EFCAB11-203ENST00000550103 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
EFCAB11-203ENST00000550103 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
EFCAB11-203ENST00000550103 SPOCK2Q92563 424 aa13□□□□□ -0.33
EFCAB11-203ENST00000550103 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
EFCAB11-203ENST00000550103 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
EFCAB11-203ENST00000550103 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
EFCAB11-203ENST00000550103 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
EFCAB11-203ENST00000550103 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
EFCAB11-203ENST00000550103 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
EFCAB11-203ENST00000550103 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
EFCAB11-203ENST00000550103 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-203ENST00000550103 ABCB7O75027 752 aa12.87□□□□□ -0.35
EFCAB11-203ENST00000550103 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
EFCAB11-203ENST00000550103 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
EFCAB11-203ENST00000550103 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
EFCAB11-203ENST00000550103 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
EFCAB11-203ENST00000550103 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
EFCAB11-203ENST00000550103 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-203ENST00000550103 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
EFCAB11-203ENST00000550103 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
EFCAB11-203ENST00000550103 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
EFCAB11-203ENST00000550103 MIER1Q8N108 512 aa12.76□□□□□ -0.37
EFCAB11-203ENST00000550103 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
EFCAB11-203ENST00000550103 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
EFCAB11-203ENST00000550103 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
EFCAB11-203ENST00000550103 RGL2O15211 777 aa12.72□□□□□ -0.37
EFCAB11-203ENST00000550103 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
EFCAB11-203ENST00000550103 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
EFCAB11-203ENST00000550103 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
EFCAB11-203ENST00000550103 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
EFCAB11-203ENST00000550103 DSG3P32926 999 aa12.7□□□□□ -0.38
EFCAB11-203ENST00000550103 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
EFCAB11-203ENST00000550103 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms