Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT9P35527 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT9P35527 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.79■□□□□ 0.92
KRT9P35527 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT9P35527 PRKY-204ENST00000533551 1019 ntBASIC20.79■□□□□ 0.92
KRT9P35527 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT9P35527 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT9P35527 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT9P35527 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT9P35527 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
KRT9P35527 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 AC079598.2-202ENST00000546624 1451 ntBASIC20.78■□□□□ 0.92
KRT9P35527 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
KRT9P35527 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT9P35527 AC018470.1-201ENST00000624790 3129 ntBASIC20.78■□□□□ 0.92
KRT9P35527 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT9P35527 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT9P35527 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT9P35527 ESRRAP1-201ENST00000400596 1257 ntBASIC20.77■□□□□ 0.92
KRT9P35527 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT9P35527 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT9P35527 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT9P35527 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT9P35527 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KRT9P35527 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.77■□□□□ 0.91
KRT9P35527 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.77■□□□□ 0.91
KRT9P35527 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KRT9P35527 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KRT9P35527 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT9P35527 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KRT9P35527 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT9P35527 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.76■□□□□ 0.91
KRT9P35527 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 KRT18P16-201ENST00000510337 1294 ntBASIC20.76■□□□□ 0.91
KRT9P35527 CD99P1-205ENST00000527459 561 ntBASIC20.76■□□□□ 0.91
KRT9P35527 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT9P35527 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms