Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNNA1P35221 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 AL512353.2-201ENST00000448759 1962 ntBASIC20.07■□□□□ 0.8
CTNNA1P35221 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.07■□□□□ 0.8
CTNNA1P35221 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.07■□□□□ 0.8
CTNNA1P35221 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.07■□□□□ 0.8
CTNNA1P35221 AL109923.1-201ENST00000618799 583 ntBASIC20.07■□□□□ 0.8
CTNNA1P35221 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
CTNNA1P35221 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNNA1P35221 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNNA1P35221 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CTNNA1P35221 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.07■□□□□ 0.8
CTNNA1P35221 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTNNA1P35221 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNNA1P35221 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNNA1P35221 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.06■□□□□ 0.8
CTNNA1P35221 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CTNNA1P35221 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNNA1P35221 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 AC142086.2-201ENST00000569753 217 ntBASIC20.06■□□□□ 0.8
CTNNA1P35221 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.06■□□□□ 0.8
CTNNA1P35221 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CTNNA1P35221 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.06■□□□□ 0.8
CTNNA1P35221 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CTNNA1P35221 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTNNA1P35221 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
CTNNA1P35221 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.05■□□□□ 0.8
CTNNA1P35221 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTNNA1P35221 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTNNA1P35221 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CTNNA1P35221 UNC93B4-201ENST00000505679 747 ntBASIC20.05■□□□□ 0.8
CTNNA1P35221 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.05■□□□□ 0.8
CTNNA1P35221 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.05■□□□□ 0.8
CTNNA1P35221 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.05■□□□□ 0.8
CTNNA1P35221 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
CTNNA1P35221 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNNA1P35221 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTNNA1P35221 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNNA1P35221 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNNA1P35221 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNNA1P35221 WIZP1-201ENST00000531444 2299 ntBASIC20.04■□□□□ 0.8
CTNNA1P35221 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTNNA1P35221 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNNA1P35221 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CTNNA1P35221 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.04■□□□□ 0.8
CTNNA1P35221 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms