Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CKS2P33552 PBX2P1-201ENST00000493219 1291 ntBASIC13.99□□□□□ -0.17
CKS2P33552 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS2P33552 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.99□□□□□ -0.17
CKS2P33552 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.99□□□□□ -0.17
CKS2P33552 MIR6084-201ENST00000622012 110 ntBASIC13.99□□□□□ -0.17
CKS2P33552 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.99□□□□□ -0.17
CKS2P33552 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.99□□□□□ -0.17
CKS2P33552 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 AC012313.1-201ENST00000593393 3059 ntBASIC13.99□□□□□ -0.17
CKS2P33552 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.99□□□□□ -0.17
CKS2P33552 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CKS2P33552 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 AC091305.1-201ENST00000479476 895 ntBASIC13.98□□□□□ -0.17
CKS2P33552 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.98□□□□□ -0.17
CKS2P33552 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.98□□□□□ -0.17
CKS2P33552 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CKS2P33552 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
CKS2P33552 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CKS2P33552 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.98□□□□□ -0.17
CKS2P33552 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CKS2P33552 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
CKS2P33552 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CKS2P33552 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CKS2P33552 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.97□□□□□ -0.17
CKS2P33552 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms