Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC24.93■■□□□ 1.58
RXRBP28702 SNHG9-202ENST00000564014 471 ntBASIC24.93■■□□□ 1.58
RXRBP28702 MTDHP3-201ENST00000594186 672 ntBASIC24.93■■□□□ 1.58
RXRBP28702 AC114341.1-201ENST00000618070 349 ntBASIC24.93■■□□□ 1.58
RXRBP28702 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.93■■□□□ 1.58
RXRBP28702 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RXRBP28702 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RXRBP28702 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.93■■□□□ 1.58
RXRBP28702 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.93■■□□□ 1.58
RXRBP28702 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.93■■□□□ 1.58
RXRBP28702 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
RXRBP28702 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RXRBP28702 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.92■■□□□ 1.58
RXRBP28702 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.92■■□□□ 1.58
RXRBP28702 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 PAWRP1-201ENST00000451083 565 ntBASIC24.92■■□□□ 1.58
RXRBP28702 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.92■■□□□ 1.58
RXRBP28702 AC092910.1-201ENST00000482027 1129 ntBASIC24.92■■□□□ 1.58
RXRBP28702 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.92■■□□□ 1.58
RXRBP28702 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RXRBP28702 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.92■■□□□ 1.58
RXRBP28702 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RXRBP28702 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC24.91■■□□□ 1.58
RXRBP28702 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
RXRBP28702 PNKD-204ENST00000436005 978 ntTSL 5 BASIC24.91■■□□□ 1.58
RXRBP28702 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.91■■□□□ 1.58
RXRBP28702 PUDP-206ENST00000540122 825 ntTSL 2 BASIC24.91■■□□□ 1.58
RXRBP28702 SPCS2P1-201ENST00000561636 679 ntBASIC24.91■■□□□ 1.58
RXRBP28702 AP001269.4-201ENST00000609611 512 ntBASIC24.91■■□□□ 1.58
RXRBP28702 MIR1199-201ENST00000621445 119 ntBASIC24.91■■□□□ 1.58
RXRBP28702 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RXRBP28702 AL049796.1-201ENST00000565336 1766 ntBASIC24.9■■□□□ 1.58
RXRBP28702 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
RXRBP28702 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RXRBP28702 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RXRBP28702 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.9■■□□□ 1.58
RXRBP28702 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC24.9■■□□□ 1.58
RXRBP28702 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC24.9■■□□□ 1.58
RXRBP28702 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RXRBP28702 AC096582.2-201ENST00000510860 516 ntBASIC24.9■■□□□ 1.58
RXRBP28702 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.9■■□□□ 1.58
RXRBP28702 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.9■■□□□ 1.58
RXRBP28702 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RXRBP28702 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.9■■□□□ 1.58
RXRBP28702 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC24.9■■□□□ 1.58
RXRBP28702 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RXRBP28702 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.9■■□□□ 1.58
RXRBP28702 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.89■■□□□ 1.58
RXRBP28702 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.89■■□□□ 1.58
RXRBP28702 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 RBM17P3-201ENST00000417687 1192 ntBASIC24.89■■□□□ 1.58
RXRBP28702 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RXRBP28702 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24.89■■□□□ 1.58
RXRBP28702 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RXRBP28702 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
RXRBP28702 HLA-J-201ENST00000462773 1622 ntBASIC24.89■■□□□ 1.57
RXRBP28702 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RXRBP28702 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
RXRBP28702 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC24.88■■□□□ 1.57
RXRBP28702 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.88■■□□□ 1.57
RXRBP28702 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC24.88■■□□□ 1.57
RXRBP28702 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC24.88■■□□□ 1.57
RXRBP28702 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC24.88■■□□□ 1.57
RXRBP28702 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC24.88■■□□□ 1.57
RXRBP28702 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC24.88■■□□□ 1.57
RXRBP28702 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RXRBP28702 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RXRBP28702 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms