Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.51■□□□□ 0.23
ACKR3P25106 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.51■□□□□ 0.23
ACKR3P25106 AL160286.2-201ENST00000567150 934 ntBASIC16.51■□□□□ 0.23
ACKR3P25106 RN7SL471P-201ENST00000580476 299 ntBASIC16.51■□□□□ 0.23
ACKR3P25106 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 AC090340.1-201ENST00000620778 4980 ntBASIC16.51■□□□□ 0.23
ACKR3P25106 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.51■□□□□ 0.23
ACKR3P25106 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ACKR3P25106 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
ACKR3P25106 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ACKR3P25106 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.5■□□□□ 0.23
ACKR3P25106 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ACKR3P25106 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ACKR3P25106 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.5■□□□□ 0.23
ACKR3P25106 KRT16P5-201ENST00000455284 522 ntBASIC16.5■□□□□ 0.23
ACKR3P25106 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.5■□□□□ 0.23
ACKR3P25106 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.5■□□□□ 0.23
ACKR3P25106 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.5■□□□□ 0.23
ACKR3P25106 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ACKR3P25106 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
ACKR3P25106 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ACKR3P25106 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.49■□□□□ 0.23
ACKR3P25106 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ACKR3P25106 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ACKR3P25106 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 FEM1AP3-201ENST00000403722 1741 ntBASIC16.49■□□□□ 0.23
ACKR3P25106 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.49■□□□□ 0.23
ACKR3P25106 AC133681.1-201ENST00000465482 601 ntBASIC16.49■□□□□ 0.23
ACKR3P25106 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.49■□□□□ 0.23
ACKR3P25106 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.49■□□□□ 0.23
ACKR3P25106 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ACKR3P25106 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.49■□□□□ 0.23
ACKR3P25106 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ACKR3P25106 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ACKR3P25106 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.48■□□□□ 0.23
ACKR3P25106 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.48■□□□□ 0.23
ACKR3P25106 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ACKR3P25106 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ACKR3P25106 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.48■□□□□ 0.23
ACKR3P25106 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACKR3P25106 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.48■□□□□ 0.23
ACKR3P25106 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.48■□□□□ 0.23
ACKR3P25106 AC128676.1-201ENST00000454392 318 ntBASIC16.48■□□□□ 0.23
ACKR3P25106 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.48■□□□□ 0.23
ACKR3P25106 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.48■□□□□ 0.23
ACKR3P25106 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms