Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL8A2P25067 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.05■□□□□ 0.16
COL8A2P25067 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL8A2P25067 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
COL8A2P25067 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.04■□□□□ 0.16
COL8A2P25067 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 AK4P3-201ENST00000418260 669 ntBASIC16.04■□□□□ 0.16
COL8A2P25067 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.04■□□□□ 0.16
COL8A2P25067 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.04■□□□□ 0.16
COL8A2P25067 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 AC139887.4-201ENST00000607877 719 ntBASIC16.04■□□□□ 0.16
COL8A2P25067 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.04■□□□□ 0.16
COL8A2P25067 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
COL8A2P25067 AL158211.5-201ENST00000623583 2518 ntBASIC16.04■□□□□ 0.16
COL8A2P25067 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL8A2P25067 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COL8A2P25067 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL8A2P25067 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.03■□□□□ 0.16
COL8A2P25067 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.03■□□□□ 0.16
COL8A2P25067 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COL8A2P25067 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COL8A2P25067 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.03■□□□□ 0.16
COL8A2P25067 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
COL8A2P25067 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
COL8A2P25067 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.03■□□□□ 0.16
COL8A2P25067 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 AC117947.1-201ENST00000427448 529 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 TSPY21P-201ENST00000433481 731 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COL8A2P25067 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.03■□□□□ 0.16
COL8A2P25067 NTF6B-201ENST00000591913 560 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 AC141257.4-201ENST00000634557 245 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 AC136944.6-201ENST00000634818 245 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
COL8A2P25067 AL020996.1-203ENST00000536896 2307 ntBASIC16.03■□□□□ 0.16
COL8A2P25067 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL8A2P25067 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
COL8A2P25067 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COL8A2P25067 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
COL8A2P25067 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
COL8A2P25067 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.02■□□□□ 0.16
COL8A2P25067 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.02■□□□□ 0.16
COL8A2P25067 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL8A2P25067 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.02■□□□□ 0.16
COL8A2P25067 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms