Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.33■□□□□ 0.69
NFKB1P19838 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.33■□□□□ 0.69
NFKB1P19838 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.33■□□□□ 0.69
NFKB1P19838 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NFKB1P19838 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NFKB1P19838 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKB1P19838 B3GAT3P1-201ENST00000471720 806 ntBASIC19.33■□□□□ 0.68
NFKB1P19838 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.33■□□□□ 0.68
NFKB1P19838 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.33■□□□□ 0.68
NFKB1P19838 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
NFKB1P19838 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.33■□□□□ 0.68
NFKB1P19838 MIR6786-201ENST00000616843 113 ntBASIC19.33■□□□□ 0.68
NFKB1P19838 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.33■□□□□ 0.68
NFKB1P19838 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NFKB1P19838 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKB1P19838 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKB1P19838 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKB1P19838 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NFKB1P19838 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKB1P19838 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKB1P19838 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 MESTP1-201ENST00000404287 994 ntBASIC19.32■□□□□ 0.68
NFKB1P19838 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKB1P19838 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKB1P19838 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKB1P19838 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKB1P19838 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKB1P19838 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKB1P19838 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKB1P19838 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NFKB1P19838 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKB1P19838 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKB1P19838 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NFKB1P19838 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKB1P19838 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NFKB1P19838 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKB1P19838 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.31■□□□□ 0.68
NFKB1P19838 AC012618.2-201ENST00000428058 849 ntBASIC19.31■□□□□ 0.68
NFKB1P19838 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 PRSS44-201ENST00000515154 1146 ntBASIC19.31■□□□□ 0.68
NFKB1P19838 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.31■□□□□ 0.68
NFKB1P19838 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKB1P19838 AC233702.5-201ENST00000584107 538 ntBASIC19.31■□□□□ 0.68
NFKB1P19838 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
NFKB1P19838 AC130371.2-201ENST00000619443 611 ntBASIC19.31■□□□□ 0.68
NFKB1P19838 AC113410.3-201ENST00000623366 203 ntBASIC19.31■□□□□ 0.68
NFKB1P19838 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NFKB1P19838 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKB1P19838 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
NFKB1P19838 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NFKB1P19838 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.3■□□□□ 0.68
NFKB1P19838 Z99916.2-201ENST00000604037 246 ntBASIC19.3■□□□□ 0.68
NFKB1P19838 AL049637.2-201ENST00000641778 930 ntBASIC19.3■□□□□ 0.68
NFKB1P19838 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.3■□□□□ 0.68
NFKB1P19838 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms