Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RARAP10276 WIZP1-201ENST00000531444 2299 ntBASIC19.96■□□□□ 0.79
RARAP10276 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.96■□□□□ 0.79
RARAP10276 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RARAP10276 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RARAP10276 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RARAP10276 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.95■□□□□ 0.78
RARAP10276 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.95■□□□□ 0.78
RARAP10276 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RARAP10276 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.95■□□□□ 0.78
RARAP10276 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.95■□□□□ 0.78
RARAP10276 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.95■□□□□ 0.78
RARAP10276 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
RARAP10276 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RARAP10276 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RARAP10276 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RARAP10276 AL512353.2-201ENST00000448759 1962 ntBASIC19.94■□□□□ 0.78
RARAP10276 Z98044.1-201ENST00000632503 1764 ntBASIC19.94■□□□□ 0.78
RARAP10276 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.94■□□□□ 0.78
RARAP10276 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RARAP10276 ITM2C-210ENST00000620962 501 ntBASIC19.94■□□□□ 0.78
RARAP10276 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.94■□□□□ 0.78
RARAP10276 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RARAP10276 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.94■□□□□ 0.78
RARAP10276 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RARAP10276 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.94■□□□□ 0.78
RARAP10276 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.93■□□□□ 0.78
RARAP10276 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.93■□□□□ 0.78
RARAP10276 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.93■□□□□ 0.78
RARAP10276 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.93■□□□□ 0.78
RARAP10276 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RARAP10276 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.93■□□□□ 0.78
RARAP10276 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.93■□□□□ 0.78
RARAP10276 HTR7P1-201ENST00000538670 1336 ntBASIC19.93■□□□□ 0.78
RARAP10276 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 FEM1AP3-201ENST00000403722 1741 ntBASIC19.93■□□□□ 0.78
RARAP10276 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.93■□□□□ 0.78
RARAP10276 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RARAP10276 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 KRT8P41-201ENST00000533985 1514 ntBASIC19.92■□□□□ 0.78
RARAP10276 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
RARAP10276 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 AL359736.2-201ENST00000621992 437 ntBASIC19.92■□□□□ 0.78
RARAP10276 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms