Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FREM3P0C091 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FREM3P0C091 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.26■□□□□ 0.35
FREM3P0C091 NTF6B-201ENST00000591913 560 ntBASIC17.26■□□□□ 0.35
FREM3P0C091 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FREM3P0C091 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FREM3P0C091 AP000974.1-201ENST00000623909 2387 ntBASIC17.25■□□□□ 0.35
FREM3P0C091 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM3P0C091 AL020996.1-203ENST00000536896 2307 ntBASIC17.25■□□□□ 0.35
FREM3P0C091 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.25■□□□□ 0.35
FREM3P0C091 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.25■□□□□ 0.35
FREM3P0C091 YBX1P2-201ENST00000489612 999 ntBASIC17.25■□□□□ 0.35
FREM3P0C091 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.25■□□□□ 0.35
FREM3P0C091 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.25■□□□□ 0.35
FREM3P0C091 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FREM3P0C091 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.25■□□□□ 0.35
FREM3P0C091 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
FREM3P0C091 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.24■□□□□ 0.35
FREM3P0C091 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FREM3P0C091 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.24■□□□□ 0.35
FREM3P0C091 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
FREM3P0C091 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.24■□□□□ 0.35
FREM3P0C091 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FREM3P0C091 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
FREM3P0C091 AL023803.3-201ENST00000615559 522 ntBASIC17.24■□□□□ 0.35
FREM3P0C091 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
FREM3P0C091 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FREM3P0C091 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.24■□□□□ 0.35
FREM3P0C091 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FREM3P0C091 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
FREM3P0C091 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
FREM3P0C091 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM3P0C091 TNXA-203ENST00000507684 2038 ntBASIC17.23■□□□□ 0.35
FREM3P0C091 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM3P0C091 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
FREM3P0C091 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.23■□□□□ 0.35
FREM3P0C091 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.23■□□□□ 0.35
FREM3P0C091 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FREM3P0C091 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FREM3P0C091 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms