Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.48■■□□□ 1.03
HOXC6P09630 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.48■■□□□ 1.03
HOXC6P09630 AL845331.1-201ENST00000424978 1190 ntBASIC21.48■■□□□ 1.03
HOXC6P09630 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.48■■□□□ 1.03
HOXC6P09630 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
HOXC6P09630 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
HOXC6P09630 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HOXC6P09630 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HOXC6P09630 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC6P09630 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.47■■□□□ 1.03
HOXC6P09630 MIR662-201ENST00000384847 95 ntBASIC21.47■■□□□ 1.03
HOXC6P09630 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HOXC6P09630 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 AP002414.4-201ENST00000589764 1148 ntBASIC21.47■■□□□ 1.03
HOXC6P09630 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.47■■□□□ 1.03
HOXC6P09630 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.47■■□□□ 1.03
HOXC6P09630 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HOXC6P09630 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.47■■□□□ 1.03
HOXC6P09630 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HOXC6P09630 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.47■■□□□ 1.03
HOXC6P09630 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HOXC6P09630 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HOXC6P09630 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HOXC6P09630 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.46■■□□□ 1.03
HOXC6P09630 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.46■■□□□ 1.03
HOXC6P09630 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 CHCHD2P8-201ENST00000429873 447 ntBASIC21.46■■□□□ 1.03
HOXC6P09630 MCCD1P1-208ENST00000445732 328 ntBASIC21.46■■□□□ 1.03
HOXC6P09630 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.46■■□□□ 1.03
HOXC6P09630 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC6P09630 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.46■■□□□ 1.03
HOXC6P09630 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC6P09630 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.46■■□□□ 1.03
HOXC6P09630 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HOXC6P09630 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.46■■□□□ 1.03
HOXC6P09630 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HOXC6P09630 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
HOXC6P09630 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HOXC6P09630 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.45■■□□□ 1.02
HOXC6P09630 SDHAP1-207ENST00000440850 2000 ntBASIC21.45■■□□□ 1.02
HOXC6P09630 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.45■■□□□ 1.02
HOXC6P09630 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
HOXC6P09630 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HOXC6P09630 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.45■■□□□ 1.02
HOXC6P09630 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.45■■□□□ 1.02
HOXC6P09630 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.45■■□□□ 1.02
HOXC6P09630 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
HOXC6P09630 KRT8P3-201ENST00000519669 1449 ntBASIC21.45■■□□□ 1.02
HOXC6P09630 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.45■■□□□ 1.02
HOXC6P09630 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HOXC6P09630 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HOXC6P09630 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.44■■□□□ 1.02
HOXC6P09630 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.44■■□□□ 1.02
HOXC6P09630 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HOXC6P09630 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms