Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP2P08253 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
MMP2P08253 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MMP2P08253 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.15■□□□□ 0.66
MMP2P08253 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.15■□□□□ 0.66
MMP2P08253 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
MMP2P08253 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MMP2P08253 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
MMP2P08253 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MMP2P08253 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MMP2P08253 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP2P08253 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.14■□□□□ 0.66
MMP2P08253 AC093503.3-201ENST00000624917 2352 ntBASIC19.14■□□□□ 0.66
MMP2P08253 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MMP2P08253 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP2P08253 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 MIR1238-201ENST00000408483 83 ntBASIC19.14■□□□□ 0.65
MMP2P08253 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP2P08253 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.14■□□□□ 0.65
MMP2P08253 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP2P08253 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 KRT8P9-201ENST00000558927 1449 ntBASIC19.14■□□□□ 0.65
MMP2P08253 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.14■□□□□ 0.65
MMP2P08253 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MMP2P08253 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.13■□□□□ 0.65
MMP2P08253 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
MMP2P08253 AC008622.2-201ENST00000617006 1229 ntBASIC19.13■□□□□ 0.65
MMP2P08253 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MMP2P08253 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MMP2P08253 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.13■□□□□ 0.65
MMP2P08253 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.13■□□□□ 0.65
MMP2P08253 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
MMP2P08253 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MMP2P08253 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MMP2P08253 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 AC083906.6-201ENST00000641366 219 ntBASIC19.12■□□□□ 0.65
MMP2P08253 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP2P08253 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP2P08253 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MMP2P08253 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MMP2P08253 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP2P08253 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP2P08253 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP2P08253 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
MMP2P08253 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP2P08253 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP2P08253 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.11■□□□□ 0.65
MMP2P08253 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
MMP2P08253 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 AL512353.2-201ENST00000448759 1962 ntBASIC19.11■□□□□ 0.65
MMP2P08253 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
MMP2P08253 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP2P08253 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
MMP2P08253 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms