Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFAP04085 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PDGFAP04085 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFAP04085 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.75■□□□□ 0.43
PDGFAP04085 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDGFAP04085 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.75■□□□□ 0.43
PDGFAP04085 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
PDGFAP04085 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFAP04085 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDGFAP04085 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PDGFAP04085 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.74■□□□□ 0.43
PDGFAP04085 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFAP04085 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.74■□□□□ 0.43
PDGFAP04085 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.74■□□□□ 0.43
PDGFAP04085 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.74■□□□□ 0.43
PDGFAP04085 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PDGFAP04085 AC140113.3-201ENST00000605663 199 ntBASIC17.74■□□□□ 0.43
PDGFAP04085 AC116407.4-201ENST00000623319 1061 ntBASIC17.74■□□□□ 0.43
PDGFAP04085 AL031432.5-201ENST00000641059 760 ntBASIC17.74■□□□□ 0.43
PDGFAP04085 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDGFAP04085 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDGFAP04085 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFAP04085 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDGFAP04085 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDGFAP04085 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.73■□□□□ 0.43
PDGFAP04085 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.73■□□□□ 0.43
PDGFAP04085 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 PRSS44-201ENST00000515154 1146 ntBASIC17.73■□□□□ 0.43
PDGFAP04085 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.73■□□□□ 0.43
PDGFAP04085 AP003041.3-201ENST00000527151 707 ntBASIC17.73■□□□□ 0.43
PDGFAP04085 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 AL160286.2-201ENST00000567150 934 ntBASIC17.73■□□□□ 0.43
PDGFAP04085 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.73■□□□□ 0.43
PDGFAP04085 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDGFAP04085 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDGFAP04085 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 KRT8P45-201ENST00000414328 1447 ntBASIC17.72■□□□□ 0.43
PDGFAP04085 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDGFAP04085 AC005082.1-201ENST00000413042 2259 ntBASIC17.72■□□□□ 0.43
PDGFAP04085 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDGFAP04085 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 AL450487.1-201ENST00000426799 995 ntBASIC17.72■□□□□ 0.43
PDGFAP04085 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFAP04085 HCG4P8-203ENST00000443049 980 ntBASIC17.72■□□□□ 0.43
PDGFAP04085 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.72■□□□□ 0.43
PDGFAP04085 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.72■□□□□ 0.43
PDGFAP04085 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.72■□□□□ 0.43
PDGFAP04085 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.72■□□□□ 0.43
PDGFAP04085 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFAP04085 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.72■□□□□ 0.43
PDGFAP04085 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.72■□□□□ 0.43
PDGFAP04085 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDGFAP04085 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFAP04085 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.71■□□□□ 0.43
PDGFAP04085 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDGFAP04085 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.71■□□□□ 0.43
PDGFAP04085 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDGFAP04085 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms