Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC29.67■■■□□ 2.34
PCF11O94913 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
PCF11O94913 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
PCF11O94913 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.66■■■□□ 2.34
PCF11O94913 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 AL157888.1-201ENST00000631930 593 ntBASIC29.66■■■□□ 2.34
PCF11O94913 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
PCF11O94913 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
PCF11O94913 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PCF11O94913 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC29.66■■■□□ 2.34
PCF11O94913 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 AC034232.1-201ENST00000506026 1064 ntBASIC29.65■■■□□ 2.34
PCF11O94913 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.65■■■□□ 2.34
PCF11O94913 CALM1-205ENST00000553542 877 ntTSL 5 BASIC29.65■■■□□ 2.34
PCF11O94913 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC29.65■■■□□ 2.34
PCF11O94913 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC29.65■■■□□ 2.34
PCF11O94913 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC29.65■■■□□ 2.34
PCF11O94913 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC29.65■■■□□ 2.34
PCF11O94913 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PCF11O94913 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC29.65■■■□□ 2.34
PCF11O94913 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
PCF11O94913 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
PCF11O94913 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.64■■■□□ 2.34
PCF11O94913 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PCF11O94913 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
PCF11O94913 ATP5G2P1-201ENST00000433580 426 ntBASIC29.64■■■□□ 2.33
PCF11O94913 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.64■■■□□ 2.33
PCF11O94913 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.64■■■□□ 2.33
PCF11O94913 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
PCF11O94913 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC29.63■■■□□ 2.33
PCF11O94913 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC29.63■■■□□ 2.33
PCF11O94913 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC29.63■■■□□ 2.33
PCF11O94913 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC29.63■■■□□ 2.33
PCF11O94913 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 ELP6-205ENST00000439305 880 ntTSL 2 BASIC29.63■■■□□ 2.33
PCF11O94913 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.63■■■□□ 2.33
PCF11O94913 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC29.63■■■□□ 2.33
PCF11O94913 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.63■■■□□ 2.33
PCF11O94913 KATNBL1P6-202ENST00000562413 1466 ntBASIC29.63■■■□□ 2.33
PCF11O94913 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
PCF11O94913 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
PCF11O94913 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
PCF11O94913 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.62■■■□□ 2.33
PCF11O94913 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
PCF11O94913 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 AC093525.10-201ENST00000625130 1569 ntBASIC29.62■■■□□ 2.33
PCF11O94913 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.62■■■□□ 2.33
PCF11O94913 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
PCF11O94913 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC29.62■■■□□ 2.33
PCF11O94913 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PCF11O94913 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 ME2-218ENST00000640965 2476 ntTSL 5 BASIC29.61■■■□□ 2.33
PCF11O94913 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.61■■■□□ 2.33
PCF11O94913 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.61■■■□□ 2.33
PCF11O94913 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC29.61■■■□□ 2.33
PCF11O94913 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.61■■■□□ 2.33
PCF11O94913 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCF11O94913 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCF11O94913 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC29.6■■■□□ 2.33
PCF11O94913 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms