Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.58■□□□□ 0.73
TSPAN3O60637 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TSPAN3O60637 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TSPAN3O60637 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.58■□□□□ 0.73
TSPAN3O60637 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TSPAN3O60637 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TSPAN3O60637 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.58■□□□□ 0.72
TSPAN3O60637 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
TSPAN3O60637 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TSPAN3O60637 TEX21P-204ENST00000641479 1693 ntBASIC19.58■□□□□ 0.72
TSPAN3O60637 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TSPAN3O60637 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TSPAN3O60637 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
TSPAN3O60637 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
TSPAN3O60637 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TSPAN3O60637 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TSPAN3O60637 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
TSPAN3O60637 AC008622.2-201ENST00000617006 1229 ntBASIC19.57■□□□□ 0.72
TSPAN3O60637 AC006011.2-201ENST00000621313 1158 ntBASIC19.57■□□□□ 0.72
TSPAN3O60637 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TSPAN3O60637 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TSPAN3O60637 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.57■□□□□ 0.72
TSPAN3O60637 AC093484.2-201ENST00000580996 2166 ntBASIC19.57■□□□□ 0.72
TSPAN3O60637 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TSPAN3O60637 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.57■□□□□ 0.72
TSPAN3O60637 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TSPAN3O60637 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.56■□□□□ 0.72
TSPAN3O60637 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.56■□□□□ 0.72
TSPAN3O60637 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TSPAN3O60637 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TSPAN3O60637 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.56■□□□□ 0.72
TSPAN3O60637 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.56■□□□□ 0.72
TSPAN3O60637 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TSPAN3O60637 KRT18P35-201ENST00000510488 1269 ntBASIC19.56■□□□□ 0.72
TSPAN3O60637 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TSPAN3O60637 KRT8P45-201ENST00000414328 1447 ntBASIC19.56■□□□□ 0.72
TSPAN3O60637 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.56■□□□□ 0.72
TSPAN3O60637 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TSPAN3O60637 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TSPAN3O60637 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.55■□□□□ 0.72
TSPAN3O60637 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.55■□□□□ 0.72
TSPAN3O60637 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.55■□□□□ 0.72
TSPAN3O60637 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TSPAN3O60637 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.55■□□□□ 0.72
TSPAN3O60637 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.55■□□□□ 0.72
TSPAN3O60637 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.55■□□□□ 0.72
TSPAN3O60637 AC139887.4-201ENST00000607877 719 ntBASIC19.55■□□□□ 0.72
TSPAN3O60637 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TSPAN3O60637 AL138966.2-201ENST00000621997 464 ntBASIC19.55■□□□□ 0.72
TSPAN3O60637 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.55■□□□□ 0.72
TSPAN3O60637 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TSPAN3O60637 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TSPAN3O60637 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TSPAN3O60637 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TSPAN3O60637 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.54■□□□□ 0.72
TSPAN3O60637 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
TSPAN3O60637 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
TSPAN3O60637 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
TSPAN3O60637 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TSPAN3O60637 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 BX664615.1-201ENST00000443558 458 ntBASIC19.54■□□□□ 0.72
TSPAN3O60637 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 DUX4L26-201ENST00000489078 1255 ntBASIC19.54■□□□□ 0.72
TSPAN3O60637 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.54■□□□□ 0.72
TSPAN3O60637 MIR4674-201ENST00000582457 87 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms