Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL121603.2-201ENST00000557373 2117 ntBASIC18.47■□□□□ 0.55
GFRA3O60609 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
GFRA3O60609 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.47■□□□□ 0.55
GFRA3O60609 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.47■□□□□ 0.55
GFRA3O60609 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.47■□□□□ 0.55
GFRA3O60609 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.47■□□□□ 0.55
GFRA3O60609 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.47■□□□□ 0.55
GFRA3O60609 RN7SL606P-201ENST00000472779 293 ntBASIC18.47■□□□□ 0.55
GFRA3O60609 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
GFRA3O60609 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GFRA3O60609 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GFRA3O60609 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GFRA3O60609 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GFRA3O60609 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.46■□□□□ 0.55
GFRA3O60609 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.46■□□□□ 0.55
GFRA3O60609 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.46■□□□□ 0.55
GFRA3O60609 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.46■□□□□ 0.55
GFRA3O60609 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.46■□□□□ 0.55
GFRA3O60609 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.46■□□□□ 0.55
GFRA3O60609 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.46■□□□□ 0.55
GFRA3O60609 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
GFRA3O60609 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
GFRA3O60609 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.46■□□□□ 0.55
GFRA3O60609 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GFRA3O60609 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
GFRA3O60609 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GFRA3O60609 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFRA3O60609 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
GFRA3O60609 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFRA3O60609 AC092474.2-201ENST00000424288 719 ntBASIC18.45■□□□□ 0.54
GFRA3O60609 KRT18P23-201ENST00000435622 1283 ntBASIC18.45■□□□□ 0.54
GFRA3O60609 FGFR3P6-201ENST00000457012 610 ntBASIC18.45■□□□□ 0.54
GFRA3O60609 AC092910.1-201ENST00000482027 1129 ntBASIC18.45■□□□□ 0.54
GFRA3O60609 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.45■□□□□ 0.54
GFRA3O60609 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.45■□□□□ 0.54
GFRA3O60609 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.45■□□□□ 0.54
GFRA3O60609 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFRA3O60609 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
GFRA3O60609 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.45■□□□□ 0.54
GFRA3O60609 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 RNA5SP415-201ENST00000517246 115 ntBASIC18.44■□□□□ 0.54
GFRA3O60609 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.44■□□□□ 0.54
GFRA3O60609 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 AC011840.4-201ENST00000578471 627 ntBASIC18.44■□□□□ 0.54
GFRA3O60609 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.44■□□□□ 0.54
GFRA3O60609 MIR3180-5-201ENST00000583743 153 ntBASIC18.44■□□□□ 0.54
GFRA3O60609 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.44■□□□□ 0.54
GFRA3O60609 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GFRA3O60609 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.44■□□□□ 0.54
GFRA3O60609 C9orf163-202ENST00000624034 2573 ntBASIC18.43■□□□□ 0.54
GFRA3O60609 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
GFRA3O60609 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
GFRA3O60609 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.43■□□□□ 0.54
GFRA3O60609 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GFRA3O60609 AC096582.2-201ENST00000510860 516 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms