Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.52■□□□□ 0.07
SSSCA1O60232 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.51■□□□□ 0.07
SSSCA1O60232 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.51■□□□□ 0.07
SSSCA1O60232 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SSSCA1O60232 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.51■□□□□ 0.07
SSSCA1O60232 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SSSCA1O60232 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SSSCA1O60232 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SSSCA1O60232 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 AC104417.2-201ENST00000562989 1793 ntBASIC15.5■□□□□ 0.07
SSSCA1O60232 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 AL355472.2-201ENST00000422958 438 ntBASIC15.5■□□□□ 0.07
SSSCA1O60232 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SSSCA1O60232 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SSSCA1O60232 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.5■□□□□ 0.07
SSSCA1O60232 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SSSCA1O60232 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.5■□□□□ 0.07
SSSCA1O60232 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.5■□□□□ 0.07
SSSCA1O60232 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SSSCA1O60232 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SSSCA1O60232 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SSSCA1O60232 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 TFP1-202ENST00000475455 1573 ntBASIC15.49■□□□□ 0.07
SSSCA1O60232 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SSSCA1O60232 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SSSCA1O60232 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.49■□□□□ 0.07
SSSCA1O60232 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
SSSCA1O60232 AL589743.5-201ENST00000616611 1050 ntBASIC15.49■□□□□ 0.07
SSSCA1O60232 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SSSCA1O60232 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.49■□□□□ 0.07
SSSCA1O60232 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SSSCA1O60232 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.49■□□□□ 0.07
SSSCA1O60232 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.49■□□□□ 0.07
SSSCA1O60232 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.48■□□□□ 0.07
SSSCA1O60232 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SSSCA1O60232 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SSSCA1O60232 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms