Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.33■■□□□ 1.01
ACTN4O43707 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.33■■□□□ 1.01
ACTN4O43707 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ACTN4O43707 AC004980.1-204ENST00000429707 299 ntBASIC21.33■■□□□ 1.01
ACTN4O43707 AC128676.1-201ENST00000454392 318 ntBASIC21.33■■□□□ 1.01
ACTN4O43707 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.33■■□□□ 1.01
ACTN4O43707 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.33■■□□□ 1.01
ACTN4O43707 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
ACTN4O43707 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
ACTN4O43707 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.33■■□□□ 1
ACTN4O43707 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ACTN4O43707 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.33■■□□□ 1
ACTN4O43707 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 ANO7L1-203ENST00000602586 1720 ntBASIC21.32■■□□□ 1
ACTN4O43707 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACTN4O43707 NIFKP9-201ENST00000419265 221 ntBASIC21.32■■□□□ 1
ACTN4O43707 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.32■■□□□ 1
ACTN4O43707 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACTN4O43707 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
ACTN4O43707 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.32■■□□□ 1
ACTN4O43707 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACTN4O43707 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.32■■□□□ 1
ACTN4O43707 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.32■■□□□ 1
ACTN4O43707 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ACTN4O43707 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
ACTN4O43707 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.31■■□□□ 1
ACTN4O43707 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 KRT8P11-201ENST00000409686 1436 ntBASIC21.31■■□□□ 1
ACTN4O43707 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.31■■□□□ 1
ACTN4O43707 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.31■■□□□ 1
ACTN4O43707 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 AC120498.9-201ENST00000339021 3867 ntBASIC21.31■■□□□ 1
ACTN4O43707 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 AC005082.1-201ENST00000413042 2259 ntBASIC21.31■■□□□ 1
ACTN4O43707 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ACTN4O43707 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ACTN4O43707 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.3■■□□□ 1
ACTN4O43707 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.3■■□□□ 1
ACTN4O43707 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.3■■□□□ 1
ACTN4O43707 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 CD99P1-205ENST00000527459 561 ntBASIC21.3■■□□□ 1
ACTN4O43707 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.3■■□□□ 1
ACTN4O43707 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ACTN4O43707 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms