Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF13O43567 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF13O43567 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF13O43567 AC239809.2-201ENST00000415381 517 ntBASIC17.31■□□□□ 0.36
RNF13O43567 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF13O43567 AL023875.1-201ENST00000640777 796 ntBASIC17.31■□□□□ 0.36
RNF13O43567 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF13O43567 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF13O43567 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF13O43567 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF13O43567 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RNF13O43567 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF13O43567 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF13O43567 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF13O43567 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 AC104581.1-202ENST00000635932 2618 ntBASIC17.3■□□□□ 0.36
RNF13O43567 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF13O43567 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF13O43567 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF13O43567 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF13O43567 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF13O43567 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF13O43567 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF13O43567 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF13O43567 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 AC006333.2-201ENST00000607957 2099 ntBASIC17.3■□□□□ 0.36
RNF13O43567 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF13O43567 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF13O43567 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF13O43567 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF13O43567 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 KRASP1-201ENST00000407852 552 ntBASIC17.29■□□□□ 0.36
RNF13O43567 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF13O43567 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF13O43567 CD99P1-205ENST00000527459 561 ntBASIC17.29■□□□□ 0.36
RNF13O43567 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF13O43567 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 AC079598.2-202ENST00000546624 1451 ntBASIC17.29■□□□□ 0.36
RNF13O43567 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 AC009113.1-201ENST00000570267 2443 ntBASIC17.29■□□□□ 0.36
RNF13O43567 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF13O43567 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF13O43567 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF13O43567 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF13O43567 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms