Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.32■□□□□ 0.68
RIPK2O43353 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RIPK2O43353 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK2O43353 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RIPK2O43353 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.31■□□□□ 0.68
RIPK2O43353 AC008764.6-201ENST00000595909 2069 ntBASIC19.31■□□□□ 0.68
RIPK2O43353 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RIPK2O43353 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.31■□□□□ 0.68
RIPK2O43353 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.31■□□□□ 0.68
RIPK2O43353 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RIPK2O43353 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.31■□□□□ 0.68
RIPK2O43353 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RIPK2O43353 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RIPK2O43353 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RIPK2O43353 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RIPK2O43353 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK2O43353 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK2O43353 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK2O43353 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RIPK2O43353 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RIPK2O43353 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK2O43353 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK2O43353 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK2O43353 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RIPK2O43353 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RIPK2O43353 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK2O43353 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.3■□□□□ 0.68
RIPK2O43353 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.3■□□□□ 0.68
RIPK2O43353 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.3■□□□□ 0.68
RIPK2O43353 AL121906.2-201ENST00000621597 723 ntBASIC19.3■□□□□ 0.68
RIPK2O43353 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RIPK2O43353 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RIPK2O43353 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.3■□□□□ 0.68
RIPK2O43353 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 MKRN4P-201ENST00000444706 1521 ntBASIC19.3■□□□□ 0.68
RIPK2O43353 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK2O43353 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 FZD10-202ENST00000539839 3282 ntBASIC19.29■□□□□ 0.68
RIPK2O43353 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 AIRN-201ENST00000601203 4374 ntBASIC19.29■□□□□ 0.68
RIPK2O43353 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.29■□□□□ 0.68
RIPK2O43353 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 RAP2CP1-201ENST00000605103 478 ntBASIC19.29■□□□□ 0.68
RIPK2O43353 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.29■□□□□ 0.68
RIPK2O43353 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.29■□□□□ 0.68
RIPK2O43353 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RIPK2O43353 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RIPK2O43353 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK2O43353 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RIPK2O43353 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms