Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP3D1O14617 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3D1O14617 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3D1O14617 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
AP3D1O14617 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
AP3D1O14617 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3D1O14617 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3D1O14617 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
AP3D1O14617 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
AP3D1O14617 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
AP3D1O14617 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3D1O14617 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3D1O14617 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3D1O14617 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 ESRRAP1-201ENST00000400596 1257 ntBASIC17.76■□□□□ 0.43
AP3D1O14617 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.76■□□□□ 0.43
AP3D1O14617 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
AP3D1O14617 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3D1O14617 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
AP3D1O14617 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3D1O14617 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
AP3D1O14617 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.75■□□□□ 0.43
AP3D1O14617 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP3D1O14617 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
AP3D1O14617 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.75■□□□□ 0.43
AP3D1O14617 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.75■□□□□ 0.43
AP3D1O14617 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.75■□□□□ 0.43
AP3D1O14617 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 AC104417.2-201ENST00000562989 1793 ntBASIC17.75■□□□□ 0.43
AP3D1O14617 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP3D1O14617 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
AP3D1O14617 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.75■□□□□ 0.43
AP3D1O14617 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3D1O14617 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3D1O14617 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms