Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 FAM207BP-201ENST00000447172 505 ntBASIC20.28■□□□□ 0.84
O00370 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.28■□□□□ 0.84
O00370 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.28■□□□□ 0.84
O00370 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 AL161938.1-201ENST00000569833 2180 ntBASIC20.28■□□□□ 0.84
O00370 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
O00370 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.27■□□□□ 0.84
O00370 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.27■□□□□ 0.84
O00370 IRX1P1-201ENST00000438849 1838 ntBASIC20.27■□□□□ 0.84
O00370 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
O00370 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
O00370 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
O00370 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
O00370 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.27■□□□□ 0.84
O00370 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.27■□□□□ 0.84
O00370 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.27■□□□□ 0.84
O00370 DGCR10-201ENST00000609839 495 ntBASIC20.27■□□□□ 0.84
O00370 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
O00370 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
O00370 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
O00370 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
O00370 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
O00370 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
O00370 KRT17P2-201ENST00000300992 1314 ntBASIC20.27■□□□□ 0.83
O00370 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
O00370 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.26■□□□□ 0.83
O00370 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
O00370 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
O00370 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
O00370 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
O00370 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.26■□□□□ 0.83
O00370 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.26■□□□□ 0.83
O00370 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.26■□□□□ 0.83
O00370 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
O00370 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.26■□□□□ 0.83
O00370 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.26■□□□□ 0.83
O00370 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.26■□□□□ 0.83
O00370 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
O00370 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
O00370 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
O00370 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
O00370 RBM17P1-201ENST00000453646 1190 ntBASIC20.25■□□□□ 0.83
O00370 TSPY15P-201ENST00000457163 923 ntBASIC20.25■□□□□ 0.83
O00370 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.25■□□□□ 0.83
O00370 PRSS44-201ENST00000515154 1146 ntBASIC20.25■□□□□ 0.83
O00370 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.25■□□□□ 0.83
O00370 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
O00370 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.25■□□□□ 0.83
O00370 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
O00370 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.25■□□□□ 0.83
O00370 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
O00370 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
O00370 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
O00370 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
O00370 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms