Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
PDLIM1O00151 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM1O00151 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM1O00151 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.08■□□□□ 0.49
PDLIM1O00151 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM1O00151 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
PDLIM1O00151 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDLIM1O00151 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 SLC29A4P1-201ENST00000398760 971 ntBASIC18.08■□□□□ 0.48
PDLIM1O00151 MIPEPP3-201ENST00000412105 444 ntBASIC18.08■□□□□ 0.48
PDLIM1O00151 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM1O00151 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM1O00151 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM1O00151 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.08■□□□□ 0.48
PDLIM1O00151 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM1O00151 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.08■□□□□ 0.48
PDLIM1O00151 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PDLIM1O00151 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PDLIM1O00151 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.08■□□□□ 0.48
PDLIM1O00151 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDLIM1O00151 AC067852.2-201ENST00000590513 2313 ntBASIC18.07■□□□□ 0.48
PDLIM1O00151 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.07■□□□□ 0.48
PDLIM1O00151 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.07■□□□□ 0.48
PDLIM1O00151 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDLIM1O00151 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.07■□□□□ 0.48
PDLIM1O00151 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.07■□□□□ 0.48
PDLIM1O00151 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.07■□□□□ 0.48
PDLIM1O00151 AL138781.1-201ENST00000566567 1274 ntBASIC18.07■□□□□ 0.48
PDLIM1O00151 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.07■□□□□ 0.48
PDLIM1O00151 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 AC093525.10-201ENST00000625130 1569 ntBASIC18.07■□□□□ 0.48
PDLIM1O00151 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
PDLIM1O00151 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
PDLIM1O00151 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PDLIM1O00151 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDLIM1O00151 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDLIM1O00151 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM1O00151 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 MCRIP2P1-201ENST00000394346 511 ntBASIC18.06■□□□□ 0.48
PDLIM1O00151 AC073210.2-201ENST00000430369 194 ntBASIC18.06■□□□□ 0.48
PDLIM1O00151 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM1O00151 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 CYP2T3P-201ENST00000601990 817 ntBASIC18.06■□□□□ 0.48
PDLIM1O00151 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM1O00151 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.06■□□□□ 0.48
PDLIM1O00151 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.06■□□□□ 0.48
PDLIM1O00151 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
PDLIM1O00151 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDLIM1O00151 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.05■□□□□ 0.48
PDLIM1O00151 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDLIM1O00151 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDLIM1O00151 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms