Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC188H7C350 AC105036.2-201ENST00000569468 176 ntBASIC19.77■□□□□ 0.76
CCDC188H7C350 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC188H7C350 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC188H7C350 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC188H7C350 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC188H7C350 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC188H7C350 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC188H7C350 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC188H7C350 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC188H7C350 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC188H7C350 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC188H7C350 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC188H7C350 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 AC004911.1-201ENST00000416316 871 ntBASIC19.76■□□□□ 0.75
CCDC188H7C350 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.76■□□□□ 0.75
CCDC188H7C350 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC188H7C350 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC188H7C350 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC188H7C350 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC188H7C350 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC188H7C350 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC188H7C350 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CCDC188H7C350 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 AC126763.1-201ENST00000552015 2118 ntBASIC19.75■□□□□ 0.75
CCDC188H7C350 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.75■□□□□ 0.75
CCDC188H7C350 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC188H7C350 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CCDC188H7C350 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC188H7C350 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 AP000997.3-201ENST00000623333 2250 ntBASIC19.75■□□□□ 0.75
CCDC188H7C350 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC188H7C350 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC188H7C350 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC188H7C350 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CCDC188H7C350 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CCDC188H7C350 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC188H7C350 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC188H7C350 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC188H7C350 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC188H7C350 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC188H7C350 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC188H7C350 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC188H7C350 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC188H7C350 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC188H7C350 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC188H7C350 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms