Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 RN7SL440P-201ENST00000577855 343 ntBASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 AL138781.2-201ENST00000617896 1843 ntBASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPDYE4A6NLX3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 AC087499.1-201ENST00000418141 1075 ntBASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPDYE4A6NLX3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 AC099398.1-201ENST00000567919 2776 ntBASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPDYE4A6NLX3 AC139713.2-201ENST00000641328 2723 ntBASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 AL355355.2-201ENST00000442321 338 ntBASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 AL355075.4-201ENST00000554988 638 ntBASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPDYE4A6NLX3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 AL390961.4-201ENST00000623958 2535 ntBASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPDYE4A6NLX3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms