Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 AC005332.1-201ENST00000577698 1310 ntBASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 ZNF444P1-201ENST00000559497 298 ntBASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 AC083849.1-201ENST00000615227 514 ntBASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MBD3L5A6NJ08 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.71■□□□□ 0.26
MBD3L5A6NJ08 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
MBD3L5A6NJ08 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
MBD3L5A6NJ08 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 FEM1AP3-201ENST00000403722 1741 ntBASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 AC116407.4-201ENST00000623319 1061 ntBASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 LINC01311-201ENST00000565162 1445 ntBASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.7■□□□□ 0.26
MBD3L5A6NJ08 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 AL109659.2-201ENST00000606809 1674 ntBASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 VENTXP5-201ENST00000523979 775 ntBASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L5A6NJ08 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms