Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 C2orf69P4-201ENST00000565394 541 ntBASIC13.43□□□□□ -0.26
LINC01546A6NGU7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AF213884.3-201ENST00000563833 479 ntBASIC13.42□□□□□ -0.26
LINC01546A6NGU7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 AC106739.1-201ENST00000617035 715 ntBASIC13.42□□□□□ -0.26
LINC01546A6NGU7 MYC-208ENST00000641036 567 ntBASIC13.42□□□□□ -0.26
LINC01546A6NGU7 MYCNOS-205ENST00000641950 531 ntBASIC13.42□□□□□ -0.26
LINC01546A6NGU7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC01546A6NGU7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.41□□□□□ -0.26
LINC01546A6NGU7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 RARRES2P4-201ENST00000514074 484 ntBASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 TERF1P2-201ENST00000583350 1212 ntBASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 AL136967.2-201ENST00000623968 743 ntBASIC13.41□□□□□ -0.26
LINC01546A6NGU7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC01546A6NGU7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms