Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TRIM49BA6NDI0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 POU5F1P3-201ENST00000428824 1078 ntBASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 C1QBPP2-201ENST00000528754 825 ntBASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
TRIM49BA6NDI0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 RPS2P4-201ENST00000476944 856 ntBASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 AC083906.6-201ENST00000641366 219 ntBASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 ANO7L1-203ENST00000602586 1720 ntBASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM49BA6NDI0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 NIFKP9-201ENST00000419265 221 ntBASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 AC004980.1-204ENST00000429707 299 ntBASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 AL445675.2-201ENST00000620291 557 ntBASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 HTR7P1-201ENST00000538670 1336 ntBASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM49BA6NDI0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM49BA6NDI0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms