Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 AC069236.1-201ENST00000604339 616 ntBASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV3S1A0A5B6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 AC073210.2-201ENST00000430369 194 ntBASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 DUX4L16-201ENST00000555130 1264 ntBASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 AC005837.3-201ENST00000612163 286 ntBASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TCRBV3S1A0A5B6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 AC135776.1-201ENST00000319817 2481 ntBASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 YBX1P10-201ENST00000444752 975 ntBASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TCRBV3S1A0A5B6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TCRBV3S1A0A5B6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms