Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL138781.1-201ENST00000566567 1274 ntBASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL121906.2-201ENST00000621597 723 ntBASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PCDHB18P-201ENST00000524813 2368 ntBASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL161938.1-201ENST00000569833 2180 ntBASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 PNMA6B-201ENST00000538162 1200 ntBASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC060766.5-201ENST00000590539 871 ntBASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RNF103-CHMP3A0A140T963 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC006333.2-201ENST00000607957 2099 ntBASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC083880.1-201ENST00000608266 535 ntBASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RNF103-CHMP3A0A140T963 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC090164.3-201ENST00000610780 2143 ntBASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL109923.1-201ENST00000618799 583 ntBASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms