Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 AL023803.3-201ENST00000615559 522 ntBASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRBV5-4A0A0C4DH59 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 AC008622.2-201ENST00000617006 1229 ntBASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 AC068587.9-201ENST00000641814 219 ntBASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 AC087289.5-201ENST00000586076 3175 ntBASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.72■□□□□ 0.59
TRBV5-4A0A0C4DH59 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-4A0A0C4DH59 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRBV5-4A0A0C4DH59 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
TRBV5-4A0A0C4DH59 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 HEIH-201ENST00000623091 1652 ntBASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 SLC25A1P2-201ENST00000430693 912 ntBASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 KRT8P9-201ENST00000558927 1449 ntBASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-4A0A0C4DH59 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AL031598.1-201ENST00000561511 1773 ntBASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 MMP23A-201ENST00000234610 1017 ntBASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-4A0A0C4DH59 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms