Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV12-3A0A0B4J271 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-3A0A0B4J271 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.15□□□□□ -0.15
TRAV12-3A0A0B4J271 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV12-3A0A0B4J271 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV12-3A0A0B4J271 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 NBPF21P-201ENST00000425093 1451 ntBASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 ID1-201ENST00000376105 1233 ntBASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 KRT17P3-201ENST00000420566 1262 ntBASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 AC006333.2-201ENST00000607957 2099 ntBASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-3A0A0B4J271 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-3A0A0B4J271 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms