Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-615P-201ENST00000516065 106 ntBASIC6.29□□□□□ -1.4
RNF39Q9H2S5 ZNF861P-201ENST00000588126 639 ntBASIC6.29□□□□□ -1.4
RNF39Q9H2S5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 AC020656.2-201ENST00000613291 5309 ntBASIC6.29□□□□□ -1.4
RNF39Q9H2S5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 Y_RNA.173-201ENST00000363776 113 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 SNORD14E-201ENST00000364009 85 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 MIR520H-201ENST00000385126 88 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 U3.32-201ENST00000408116 212 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 PHBP16-201ENST00000446318 950 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 RN7SL72P-201ENST00000460697 269 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 RN7SL466P-201ENST00000497546 295 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 ATP5LP3-201ENST00000514223 304 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 AC096996.1-201ENST00000563813 325 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 MIR3176-201ENST00000582210 90 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 MIR4443-201ENST00000585052 53 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 CU639417.4-201ENST00000623928 207 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 AC004944.1-201ENST00000517807 3059 ntBASIC6.28□□□□□ -1.4
RNF39Q9H2S5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF39Q9H2S5 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 AC107980.1-201ENST00000558671 3355 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 RNU6-655P-201ENST00000362858 107 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 RN7SL177P-201ENST00000476596 299 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 RNU6-998P-201ENST00000515894 101 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 RNU6-1057P-201ENST00000517162 102 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 AC013412.1-201ENST00000610687 192 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 AC010680.1-201ENST00000590024 3590 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 AC011266.1-201ENST00000624119 3569 ntBASIC6.27□□□□□ -1.41
RNF39Q9H2S5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.27□□□□□ -1.41
RNF39Q9H2S5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 AP004607.3-201ENST00000530354 3915 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 RNU6-681P-201ENST00000364012 104 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 SNORA32-201ENST00000384072 121 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 OR2AT2P-201ENST00000413438 905 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 RNU7-96P-201ENST00000459535 64 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 MIR4716-201ENST00000579628 84 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 MIR4260-201ENST00000583107 67 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 AL691477.1-201ENST00000624398 162 ntBASIC6.26□□□□□ -1.41
RNF39Q9H2S5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RNF39Q9H2S5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF39Q9H2S5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms