Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.87□□□□□ -1.47
PRIM1P49642 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.87□□□□□ -1.47
PRIM1P49642 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.87□□□□□ -1.47
PRIM1P49642 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.87□□□□□ -1.47
PRIM1P49642 AC241585.2-209ENST00000638217 143 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRIM1P49642 AC083843.2-201ENST00000568248 6253 ntBASIC5.87□□□□□ -1.47
PRIM1P49642 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 AC004925.1-201ENST00000624256 2706 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PRIM1P49642 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PRIM1P49642 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.86□□□□□ -1.47
PRIM1P49642 Y_RNA.127-201ENST00000363386 109 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 SNORD115-8-201ENST00000363856 82 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 SNORD115-38-201ENST00000365037 82 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 RNU4-17P-201ENST00000365598 141 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 MIR539-201ENST00000365690 78 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 RNU6-376P-201ENST00000384731 106 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 U3.37-201ENST00000408528 213 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 RNU6-628P-201ENST00000410675 107 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 CYP4F29P-201ENST00000420685 446 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 COX6B1P7-201ENST00000430845 235 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.86□□□□□ -1.47
PRIM1P49642 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.86□□□□□ -1.47
PRIM1P49642 AF186996.7-201ENST00000492781 209 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.86□□□□□ -1.47
PRIM1P49642 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 RNA5SP249-201ENST00000516127 99 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.86□□□□□ -1.47
PRIM1P49642 KLKP1-201ENST00000595979 403 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.86□□□□□ -1.47
PRIM1P49642 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.86□□□□□ -1.47
PRIM1P49642 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PRIM1P49642 AC010332.2-201ENST00000613083 1904 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 AC135776.4-201ENST00000624300 1904 ntBASIC5.86□□□□□ -1.47
PRIM1P49642 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRIM1P49642 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PRIM1P49642 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRIM1P49642 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.85□□□□□ -1.47
PRIM1P49642 AC093535.2-201ENST00000624769 2326 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.85□□□□□ -1.47
PRIM1P49642 FTLP6-201ENST00000355274 422 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 SNORA72.2-201ENST00000365028 127 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 RNU6-239P-201ENST00000390990 99 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.85□□□□□ -1.47
PRIM1P49642 SSXP4-201ENST00000451349 245 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 ZNF192P1-203ENST00000565888 810 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 AC113403.1-201ENST00000604910 193 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 AL008718.3-201ENST00000610217 321 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PRIM1P49642 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 AC024581.2-201ENST00000619986 252 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
PRIM1P49642 AL450326.2-201ENST00000421913 1962 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 AC090971.4-201ENST00000560291 1800 ntBASIC5.85□□□□□ -1.47
PRIM1P49642 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PRIM1P49642 PCAT14-202ENST00000627127 3935 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PRIM1P49642 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PRIM1P49642 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PRIM1P49642 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PRIM1P49642 RNU6-961P-201ENST00000363893 105 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RNU6-151P-201ENST00000364158 107 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PRIM1P49642 MIR569-201ENST00000385228 96 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 Y_RNA.595-201ENST00000410403 105 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RN7SKP202-201ENST00000410439 330 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RNA5SP44-201ENST00000410446 133 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RNU6-1001P-201ENST00000411265 100 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RPL27AP8-201ENST00000424277 446 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AL358075.3-201ENST00000426289 226 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AL117339.2-201ENST00000430475 180 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 RN7SL132P-201ENST00000478131 296 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.84□□□□□ -1.47
PRIM1P49642 AC107016.1-201ENST00000550463 337 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.84□□□□□ -1.47
PRIM1P49642 RN7SL600P-201ENST00000581811 299 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.84□□□□□ -1.47
PRIM1P49642 MIR6867-201ENST00000610636 67 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AC112200.1-201ENST00000625015 234 ntBASIC5.84□□□□□ -1.47
PRIM1P49642 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.84□□□□□ -1.47
PRIM1P49642 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PRIM1P49642 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.84□□□□□ -1.48
PRIM1P49642 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.83□□□□□ -1.48
PRIM1P49642 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRIM1P49642 AL139811.1-201ENST00000424779 2299 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 AC092593.1-201ENST00000515413 1815 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.83□□□□□ -1.48
PRIM1P49642 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PRIM1P49642 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PRIM1P49642 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms