RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
SSXP4-201ENST00000451349 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
SSXP4-201ENST00000451349 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
SSXP4-201ENST00000451349 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
SSXP4-201ENST00000451349 FOXD1Q16676 465 aa13.72□□□□□ -0.21
SSXP4-201ENST00000451349 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
SSXP4-201ENST00000451349 MSH5O43196 834 aa13.19□□□□□ -0.3
SSXP4-201ENST00000451349 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
SSXP4-201ENST00000451349 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
SSXP4-201ENST00000451349 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
SSXP4-201ENST00000451349 ADRA2BP18089 450 aa12.3□□□□□ -0.44
SSXP4-201ENST00000451349 DMRT2Q9Y5R5 561 aa11.6□□□□□ -0.55
SSXP4-201ENST00000451349 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
SSXP4-201ENST00000451349 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
SSXP4-201ENST00000451349 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
SSXP4-201ENST00000451349 RNF39Q9H2S5 420 aa11.13□□□□□ -0.63
SSXP4-201ENST00000451349 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
SSXP4-201ENST00000451349 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
SSXP4-201ENST00000451349 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
SSXP4-201ENST00000451349 DNAJC5BQ9UF47 199 aa10.82□□□□□ -0.68
SSXP4-201ENST00000451349 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
SSXP4-201ENST00000451349 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
SSXP4-201ENST00000451349 CNKSR2Q8WXI2 1034 aa10.74□□□□□ -0.69
SSXP4-201ENST00000451349 POTEHQ6S545 545 aa10.62□□□□□ -0.71
SSXP4-201ENST00000451349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.73
SSXP4-201ENST00000451349 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
SSXP4-201ENST00000451349 DSG3P32926 999 aa10.22□□□□□ -0.77
SSXP4-201ENST00000451349 CAPN15O75808 1086 aa10.17□□□□□ -0.78
SSXP4-201ENST00000451349 U3KPZ7 1027 aaPredicted RBP10.12□□□□□ -0.79
SSXP4-201ENST00000451349 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
SSXP4-201ENST00000451349 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
SSXP4-201ENST00000451349 APLP2Q06481 763 aa10.01□□□□□ -0.81
SSXP4-201ENST00000451349 ZNF219Q9P2Y4 722 aaPredicted RBP9.94□□□□□ -0.82
SSXP4-201ENST00000451349 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
SSXP4-201ENST00000451349 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
SSXP4-201ENST00000451349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
SSXP4-201ENST00000451349 ABCB7O75027 752 aa9.83□□□□□ -0.84
SSXP4-201ENST00000451349 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
SSXP4-201ENST00000451349 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
SSXP4-201ENST00000451349 SP7Q8TDD2 431 aaPredicted RBP9.72□□□□□ -0.85
SSXP4-201ENST00000451349 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.86
SSXP4-201ENST00000451349 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
SSXP4-201ENST00000451349 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
SSXP4-201ENST00000451349 POLA2Q14181 598 aa9.47□□□□□ -0.89
SSXP4-201ENST00000451349 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
SSXP4-201ENST00000451349 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
SSXP4-201ENST00000451349 HAX1O00165 279 aa9.41□□□□□ -0.9
SSXP4-201ENST00000451349 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
SSXP4-201ENST00000451349 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
SSXP4-201ENST00000451349 KCNA4P22459 653 aa9.31□□□□□ -0.92
SSXP4-201ENST00000451349 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSXP4-201ENST00000451349 PITPNM1O00562 1244 aa9.25□□□□□ -0.93
SSXP4-201ENST00000451349 OSCARQ8IYS5 282 aa9.18□□□□□ -0.94
SSXP4-201ENST00000451349 EVX2Q03828 476 aa9.11□□□□□ -0.95
SSXP4-201ENST00000451349 LHX8Q68G74 356 aa9.09□□□□□ -0.95
SSXP4-201ENST00000451349 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
SSXP4-201ENST00000451349 PRKAR2AP13861 404 aaKnown RBP9.02□□□□□ -0.97
SSXP4-201ENST00000451349 SPDYE2BA6NHP3 402 aa9.01□□□□□ -0.97
SSXP4-201ENST00000451349 SPDYE6P0CI01 402 aa9.01□□□□□ -0.97
SSXP4-201ENST00000451349 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
SSXP4-201ENST00000451349 ATF5Q9Y2D1 282 aaPredicted RBP9.01□□□□□ -0.97
SSXP4-201ENST00000451349 GABBR2O75899 941 aa8.99□□□□□ -0.97
SSXP4-201ENST00000451349 SPDYE1Q8NFV5 336 aaPredicted RBP8.98□□□□□ -0.97
SSXP4-201ENST00000451349 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
SSXP4-201ENST00000451349 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
SSXP4-201ENST00000451349 CLEC11AQ9Y240 323 aa8.91□□□□□ -0.98
SSXP4-201ENST00000451349 FBLN2P98095 1184 aa8.9□□□□□ -0.98
SSXP4-201ENST00000451349 CLCN6P51797 869 aa8.88□□□□□ -0.99
SSXP4-201ENST00000451349 ATXN8OSP0DMR3 200 aa8.8□□□□□ -1
SSXP4-201ENST00000451349 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
SSXP4-201ENST00000451349 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
SSXP4-201ENST00000451349 SLC4A1APQ9BWU0 796 aaKnown RBP8.75□□□□□ -1.01
SSXP4-201ENST00000451349 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
SSXP4-201ENST00000451349 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
SSXP4-201ENST00000451349 CHADLQ6NUI6 762 aa8.72□□□□□ -1.01
SSXP4-201ENST00000451349 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
SSXP4-201ENST00000451349 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
SSXP4-201ENST00000451349 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
SSXP4-201ENST00000451349 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
SSXP4-201ENST00000451349 MKRN4PQ13434 485 aaPredicted RBP8.6□□□□□ -1.03
SSXP4-201ENST00000451349 POTEMA6NI47 508 aa8.59□□□□□ -1.03
SSXP4-201ENST00000451349 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
SSXP4-201ENST00000451349 ZNF579Q8NAF0 562 aaKnown RBP8.59□□□□□ -1.03
SSXP4-201ENST00000451349 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
SSXP4-201ENST00000451349 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
SSXP4-201ENST00000451349 ZBTB22O15209 634 aa8.5□□□□□ -1.05
SSXP4-201ENST00000451349 ZRANB1Q9UGI0 708 aa8.5□□□□□ -1.05
SSXP4-201ENST00000451349 GALR2O43603 387 aaPredicted RBP8.43□□□□□ -1.06
SSXP4-201ENST00000451349 PAK3O75914 559 aaPredicted RBP8.43□□□□□ -1.06
SSXP4-201ENST00000451349 POTEB2H3BUK9 544 aa8.41□□□□□ -1.06
SSXP4-201ENST00000451349 MAMSTRQ6ZN01 415 aa8.41□□□□□ -1.06
SSXP4-201ENST00000451349 EHMT2Q96KQ7 1210 aa8.38□□□□□ -1.07
SSXP4-201ENST00000451349 STAG3Q9UJ98 1225 aa8.37□□□□□ -1.07
SSXP4-201ENST00000451349 SLC39A7Q92504 469 aa8.34□□□□□ -1.07
SSXP4-201ENST00000451349 C7P10643 843 aa8.33□□□□□ -1.08
SSXP4-201ENST00000451349 CREBZFQ9NS37 354 aa8.33□□□□□ -1.08
SSXP4-201ENST00000451349 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
SSXP4-201ENST00000451349 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
SSXP4-201ENST00000451349 ASTLQ6HA08 431 aaPredicted RBP8.29□□□□□ -1.08
SSXP4-201ENST00000451349 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms