RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 AEBP2Q6ZN18 517 aaPredicted RBP13.82□□□□□ -0.2
RNU6-1001P-201ENST00000411265 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
RNU6-1001P-201ENST00000411265 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
RNU6-1001P-201ENST00000411265 PHF23Q9BUL5 403 aaPredicted RBP11.72□□□□□ -0.53
RNU6-1001P-201ENST00000411265 FOXD1Q16676 465 aa10.95□□□□□ -0.66
RNU6-1001P-201ENST00000411265 PLPPR3Q6T4P5 718 aa10.88□□□□□ -0.67
RNU6-1001P-201ENST00000411265 ADRA2BP18089 450 aa10.38□□□□□ -0.75
RNU6-1001P-201ENST00000411265 PPP6R1Q9UPN7 881 aa10.37□□□□□ -0.75
RNU6-1001P-201ENST00000411265 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
RNU6-1001P-201ENST00000411265 MSH5O43196 834 aa10.25□□□□□ -0.77
RNU6-1001P-201ENST00000411265 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
RNU6-1001P-201ENST00000411265 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.89
RNU6-1001P-201ENST00000411265 POTEDQ86YR6 584 aa9.51□□□□□ -0.89
RNU6-1001P-201ENST00000411265 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
RNU6-1001P-201ENST00000411265 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
RNU6-1001P-201ENST00000411265 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
RNU6-1001P-201ENST00000411265 NCBP3Q53F19 620 aaKnown RBP9.3□□□□□ -0.92
RNU6-1001P-201ENST00000411265 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
RNU6-1001P-201ENST00000411265 HOXD11P31277 338 aaPredicted RBP9.15□□□□□ -0.94
RNU6-1001P-201ENST00000411265 KCNA4P22459 653 aa9.12□□□□□ -0.95
RNU6-1001P-201ENST00000411265 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
RNU6-1001P-201ENST00000411265 DCAF8L1A6NGE4 600 aa9.03□□□□□ -0.96
RNU6-1001P-201ENST00000411265 DNAJC5BQ9UF47 199 aa8.89□□□□□ -0.99
RNU6-1001P-201ENST00000411265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.75□□□□□ -1.01
RNU6-1001P-201ENST00000411265 RNF39Q9H2S5 420 aa8.71□□□□□ -1.02
RNU6-1001P-201ENST00000411265 SLC4A1APQ9BWU0 796 aaKnown RBP8.7□□□□□ -1.02
RNU6-1001P-201ENST00000411265 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
RNU6-1001P-201ENST00000411265 CACNB1Q02641 598 aaPredicted RBP8.61□□□□□ -1.03
RNU6-1001P-201ENST00000411265 SLC4A2P04920 1241 aa8.59□□□□□ -1.03
RNU6-1001P-201ENST00000411265 U3KPZ7 1027 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1001P-201ENST00000411265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.49□□□□□ -1.05
RNU6-1001P-201ENST00000411265 HNRNPUL2Q1KMD3 747 aaKnown RBP8.49□□□□□ -1.05
RNU6-1001P-201ENST00000411265 FOXD4L1Q9NU39 408 aa8.49□□□□□ -1.05
RNU6-1001P-201ENST00000411265 APLP2Q06481 763 aa8.48□□□□□ -1.05
RNU6-1001P-201ENST00000411265 MYCNP04198 464 aaPredicted RBP8.46□□□□□ -1.06
RNU6-1001P-201ENST00000411265 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
RNU6-1001P-201ENST00000411265 CAPN15O75808 1086 aa8.37□□□□□ -1.07
RNU6-1001P-201ENST00000411265 ZBTB22O15209 634 aa8.35□□□□□ -1.07
RNU6-1001P-201ENST00000411265 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1001P-201ENST00000411265 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
RNU6-1001P-201ENST00000411265 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
RNU6-1001P-201ENST00000411265 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
RNU6-1001P-201ENST00000411265 DSG3P32926 999 aa8.23□□□□□ -1.09
RNU6-1001P-201ENST00000411265 ATXN8OSP0DMR3 200 aa8.22□□□□□ -1.09
RNU6-1001P-201ENST00000411265 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
RNU6-1001P-201ENST00000411265 ABCB7O75027 752 aa8.17□□□□□ -1.1
RNU6-1001P-201ENST00000411265 ATF5Q9Y2D1 282 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1001P-201ENST00000411265 POLA2Q14181 598 aa8.1□□□□□ -1.11
RNU6-1001P-201ENST00000411265 ZBTB12Q9Y330 459 aaPredicted RBP8.06□□□□□ -1.12
RNU6-1001P-201ENST00000411265 RBM42Q9BTD8 480 aaKnown RBP7.94□□□□□ -1.14
RNU6-1001P-201ENST00000411265 FBLN2P98095 1184 aa7.93□□□□□ -1.14
RNU6-1001P-201ENST00000411265 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
RNU6-1001P-201ENST00000411265 MKRN4PQ13434 485 aaPredicted RBP7.8□□□□□ -1.16
RNU6-1001P-201ENST00000411265 SPDYE2BA6NHP3 402 aa7.78□□□□□ -1.16
RNU6-1001P-201ENST00000411265 SPDYE6P0CI01 402 aa7.78□□□□□ -1.16
RNU6-1001P-201ENST00000411265 SPDYE2Q495Y8 402 aa7.78□□□□□ -1.16
RNU6-1001P-201ENST00000411265 AKT1S1Q96B36 256 aa7.76□□□□□ -1.17
RNU6-1001P-201ENST00000411265 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
RNU6-1001P-201ENST00000411265 SSUH2Q9Y2M2 353 aa7.67□□□□□ -1.18
RNU6-1001P-201ENST00000411265 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
RNU6-1001P-201ENST00000411265 SPDYE4A6NLX3 237 aa7.61□□□□□ -1.19
RNU6-1001P-201ENST00000411265 CHRDL2Q6WN34 429 aa7.61□□□□□ -1.19
RNU6-1001P-201ENST00000411265 SPDYE1Q8NFV5 336 aaPredicted RBP7.59□□□□□ -1.19
RNU6-1001P-201ENST00000411265 PITPNM1O00562 1244 aa7.58□□□□□ -1.2
RNU6-1001P-201ENST00000411265 PABPN1Q86U42 306 aaKnown RBP eCLIP7.58□□□□□ -1.2
RNU6-1001P-201ENST00000411265 CLEC11AQ9Y240 323 aa7.54□□□□□ -1.2
RNU6-1001P-201ENST00000411265 POTEHQ6S545 545 aa7.53□□□□□ -1.2
RNU6-1001P-201ENST00000411265 STAG3Q9UJ98 1225 aa7.48□□□□□ -1.21
RNU6-1001P-201ENST00000411265 FKBP8Q14318 412 aa7.47□□□□□ -1.21
RNU6-1001P-201ENST00000411265 PRR29P0C7W0 189 aa7.45□□□□□ -1.22
RNU6-1001P-201ENST00000411265 FXR2P51116 673 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU6-1001P-201ENST00000411265 PROM2Q8N271 834 aa7.45□□□□□ -1.22
RNU6-1001P-201ENST00000411265 PIP4P2Q8N4L2 257 aa7.45□□□□□ -1.22
RNU6-1001P-201ENST00000411265 PRKAR2AP13861 404 aaKnown RBP7.39□□□□□ -1.23
RNU6-1001P-201ENST00000411265 CHADLQ6NUI6 762 aa7.32□□□□□ -1.24
RNU6-1001P-201ENST00000411265 FBXO3Q9UK99 471 aa7.31□□□□□ -1.24
RNU6-1001P-201ENST00000411265 PLEKHG5O94827 1062 aa7.3□□□□□ -1.24
RNU6-1001P-201ENST00000411265 CREBZFQ9NS37 354 aa7.28□□□□□ -1.24
RNU6-1001P-201ENST00000411265 HAX1O00165 279 aa7.27□□□□□ -1.25
RNU6-1001P-201ENST00000411265 FARP1Q9Y4F1 1045 aaPredicted RBP7.27□□□□□ -1.25
RNU6-1001P-201ENST00000411265 NPM1P06748 294 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU6-1001P-201ENST00000411265 PLCD3Q8N3E9 789 aa7.23□□□□□ -1.25
RNU6-1001P-201ENST00000411265 MIER1Q8N108 512 aa7.22□□□□□ -1.25
RNU6-1001P-201ENST00000411265 ZBTB47Q9UFB7 747 aaPredicted RBP7.22□□□□□ -1.25
RNU6-1001P-201ENST00000411265 C19orf67A6NJJ6 358 aa7.2□□□□□ -1.26
RNU6-1001P-201ENST00000411265 CD44P16070 742 aaKnown RBP7.19□□□□□ -1.26
RNU6-1001P-201ENST00000411265 PAK3O75914 559 aaPredicted RBP7.18□□□□□ -1.26
RNU6-1001P-201ENST00000411265 SP7Q8TDD2 431 aaPredicted RBP7.18□□□□□ -1.26
RNU6-1001P-201ENST00000411265 MNX1P50219 401 aaPredicted RBP7.17□□□□□ -1.26
RNU6-1001P-201ENST00000411265 VASPP50552 380 aaPredicted RBP7.17□□□□□ -1.26
RNU6-1001P-201ENST00000411265 EVX2Q03828 476 aa7.11□□□□□ -1.27
RNU6-1001P-201ENST00000411265 ZRANB1Q9UGI0 708 aa7.11□□□□□ -1.27
RNU6-1001P-201ENST00000411265 ZNF579Q8NAF0 562 aaKnown RBP7.1□□□□□ -1.27
RNU6-1001P-201ENST00000411265 CLCN6P51797 869 aa7.09□□□□□ -1.27
RNU6-1001P-201ENST00000411265 KLHL34Q8N239 644 aa7.08□□□□□ -1.28
RNU6-1001P-201ENST00000411265 FAM212AQ96EL1 285 aa7.06□□□□□ -1.28
RNU6-1001P-201ENST00000411265 TSPYL2Q9H2G4 693 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1001P-201ENST00000411265 RASEFQ8IZ41 740 aa7.04□□□□□ -1.28
RNU6-1001P-201ENST00000411265 NUBP1P53384 320 aa7.03□□□□□ -1.28
RNU6-1001P-201ENST00000411265 GABBR2O75899 941 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms