RNA–Protein interactions for RNA: ENST00000365598.1

RNU4-17P-201, Transcript of RNA, U4 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU4-17P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-17P-201ENST00000365598 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
RNU4-17P-201ENST00000365598 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
RNU4-17P-201ENST00000365598 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
RNU4-17P-201ENST00000365598 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
RNU4-17P-201ENST00000365598 FOXD1Q16676 465 aa11.98□□□□□ -0.49
RNU4-17P-201ENST00000365598 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
RNU4-17P-201ENST00000365598 MSH5O43196 834 aa11.23□□□□□ -0.61
RNU4-17P-201ENST00000365598 PIAS4Q8N2W9 510 aaPredicted RBP11.17□□□□□ -0.62
RNU4-17P-201ENST00000365598 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
RNU4-17P-201ENST00000365598 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
RNU4-17P-201ENST00000365598 ADRA2BP18089 450 aa11.08□□□□□ -0.64
RNU4-17P-201ENST00000365598 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
RNU4-17P-201ENST00000365598 DMRT2Q9Y5R5 561 aa10.18□□□□□ -0.78
RNU4-17P-201ENST00000365598 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
RNU4-17P-201ENST00000365598 PPP4R3CPQ6ZMV5 832 aa9.88□□□□□ -0.83
RNU4-17P-201ENST00000365598 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.85
RNU4-17P-201ENST00000365598 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.86
RNU4-17P-201ENST00000365598 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.86
RNU4-17P-201ENST00000365598 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
RNU4-17P-201ENST00000365598 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
RNU4-17P-201ENST00000365598 RNF39Q9H2S5 420 aa9.59□□□□□ -0.87
RNU4-17P-201ENST00000365598 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
RNU4-17P-201ENST00000365598 DNAJC5BQ9UF47 199 aa9.44□□□□□ -0.9
RNU4-17P-201ENST00000365598 C1QBPQ07021 282 aaKnown RBP9.42□□□□□ -0.9
RNU4-17P-201ENST00000365598 NPM3O75607 178 aaKnown RBP9.37□□□□□ -0.91
RNU4-17P-201ENST00000365598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU4-17P-201ENST00000365598 KCNA4P22459 653 aa9.12□□□□□ -0.95
RNU4-17P-201ENST00000365598 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
RNU4-17P-201ENST00000365598 SPINK5Q9NQ38 1064 aaPredicted RBP9□□□□□ -0.97
RNU4-17P-201ENST00000365598 SLC4A2P04920 1241 aa8.97□□□□□ -0.97
RNU4-17P-201ENST00000365598 CAPN15O75808 1086 aa8.95□□□□□ -0.98
RNU4-17P-201ENST00000365598 DSG3P32926 999 aa8.95□□□□□ -0.98
RNU4-17P-201ENST00000365598 APLP2Q06481 763 aa8.79□□□□□ -1
RNU4-17P-201ENST00000365598 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
RNU4-17P-201ENST00000365598 TRHP20396 242 aaPredicted RBP8.78□□□□□ -1
RNU4-17P-201ENST00000365598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
RNU4-17P-201ENST00000365598 HNRNPUL2Q1KMD3 747 aaKnown RBP8.77□□□□□ -1.01
RNU4-17P-201ENST00000365598 ABCB7O75027 752 aa8.76□□□□□ -1.01
RNU4-17P-201ENST00000365598 SAMD1Q6SPF0 538 aaPredicted RBP8.73□□□□□ -1.01
RNU4-17P-201ENST00000365598 POTEHQ6S545 545 aa8.69□□□□□ -1.02
RNU4-17P-201ENST00000365598 MYCNP04198 464 aaPredicted RBP8.67□□□□□ -1.02
RNU4-17P-201ENST00000365598 SLC4A1APQ9BWU0 796 aaKnown RBP8.56□□□□□ -1.04
RNU4-17P-201ENST00000365598 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
RNU4-17P-201ENST00000365598 FOXD4L1Q9NU39 408 aa8.53□□□□□ -1.04
RNU4-17P-201ENST00000365598 POLA2Q14181 598 aa8.52□□□□□ -1.05
RNU4-17P-201ENST00000365598 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
RNU4-17P-201ENST00000365598 ZBTB22O15209 634 aa8.41□□□□□ -1.06
RNU4-17P-201ENST00000365598 CHRDL2Q6WN34 429 aa8.38□□□□□ -1.07
RNU4-17P-201ENST00000365598 ZBTB12Q9Y330 459 aaPredicted RBP8.37□□□□□ -1.07
RNU4-17P-201ENST00000365598 OSCARQ8IYS5 282 aa8.32□□□□□ -1.08
RNU4-17P-201ENST00000365598 AKT1S1Q96B36 256 aa8.31□□□□□ -1.08
RNU4-17P-201ENST00000365598 ATXN8OSP0DMR3 200 aa8.25□□□□□ -1.09
RNU4-17P-201ENST00000365598 REM2Q8IYK8 340 aaPredicted RBP8.23□□□□□ -1.09
RNU4-17P-201ENST00000365598 PITPNM1O00562 1244 aa8.18□□□□□ -1.1
RNU4-17P-201ENST00000365598 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
RNU4-17P-201ENST00000365598 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNU4-17P-201ENST00000365598 FBLN2P98095 1184 aa8.11□□□□□ -1.11
RNU4-17P-201ENST00000365598 SP7Q8TDD2 431 aaPredicted RBP8.11□□□□□ -1.11
RNU4-17P-201ENST00000365598 SPDYE2BA6NHP3 402 aa8.1□□□□□ -1.11
RNU4-17P-201ENST00000365598 SPDYE6P0CI01 402 aa8.1□□□□□ -1.11
RNU4-17P-201ENST00000365598 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
RNU4-17P-201ENST00000365598 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
RNU4-17P-201ENST00000365598 SSUH2Q9Y2M2 353 aa8.03□□□□□ -1.12
RNU4-17P-201ENST00000365598 HAX1O00165 279 aa7.99□□□□□ -1.13
RNU4-17P-201ENST00000365598 SPDYE1Q8NFV5 336 aaPredicted RBP7.98□□□□□ -1.13
RNU4-17P-201ENST00000365598 ZNF692Q9BU19 519 aaPredicted RBP7.96□□□□□ -1.14
RNU4-17P-201ENST00000365598 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
RNU4-17P-201ENST00000365598 CLEC11AQ9Y240 323 aa7.94□□□□□ -1.14
RNU4-17P-201ENST00000365598 EVX2Q03828 476 aa7.93□□□□□ -1.14
RNU4-17P-201ENST00000365598 CSRNP3Q8WYN3 585 aa7.91□□□□□ -1.14
RNU4-17P-201ENST00000365598 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU4-17P-201ENST00000365598 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
RNU4-17P-201ENST00000365598 CHADLQ6NUI6 762 aa7.83□□□□□ -1.16
RNU4-17P-201ENST00000365598 PRR29P0C7W0 189 aa7.78□□□□□ -1.16
RNU4-17P-201ENST00000365598 EHMT2Q96KQ7 1210 aa7.75□□□□□ -1.17
RNU4-17P-201ENST00000365598 GABBR2O75899 941 aa7.73□□□□□ -1.17
RNU4-17P-201ENST00000365598 CD44P16070 742 aaKnown RBP7.69□□□□□ -1.18
RNU4-17P-201ENST00000365598 FARP1Q9Y4F1 1045 aaPredicted RBP7.69□□□□□ -1.18
RNU4-17P-201ENST00000365598 SPDYE4A6NLX3 237 aa7.63□□□□□ -1.19
RNU4-17P-201ENST00000365598 CREBZFQ9NS37 354 aa7.63□□□□□ -1.19
RNU4-17P-201ENST00000365598 POTEIP0CG38 1075 aa7.61□□□□□ -1.19
RNU4-17P-201ENST00000365598 STAG3Q9UJ98 1225 aa7.6□□□□□ -1.19
RNU4-17P-201ENST00000365598 ZNF579Q8NAF0 562 aaKnown RBP7.59□□□□□ -1.19
RNU4-17P-201ENST00000365598 LHX8Q68G74 356 aa7.58□□□□□ -1.2
RNU4-17P-201ENST00000365598 CLCN6P51797 869 aa7.55□□□□□ -1.2
RNU4-17P-201ENST00000365598 ZRANB1Q9UGI0 708 aa7.54□□□□□ -1.2
RNU4-17P-201ENST00000365598 MNX1P50219 401 aaPredicted RBP7.51□□□□□ -1.21
RNU4-17P-201ENST00000365598 GALR2O43603 387 aaPredicted RBP7.5□□□□□ -1.21
RNU4-17P-201ENST00000365598 PROM2Q8N271 834 aa7.49□□□□□ -1.21
RNU4-17P-201ENST00000365598 DCBLD2Q96PD2 775 aa7.48□□□□□ -1.21
RNU4-17P-201ENST00000365598 PHF12Q96QT6 1004 aa7.47□□□□□ -1.21
RNU4-17P-201ENST00000365598 PAK3O75914 559 aaPredicted RBP7.45□□□□□ -1.22
RNU4-17P-201ENST00000365598 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
RNU4-17P-201ENST00000365598 MS4A3Q96HJ5 214 aa7.38□□□□□ -1.23
RNU4-17P-201ENST00000365598 POTEB2H3BUK9 544 aa7.35□□□□□ -1.23
RNU4-17P-201ENST00000365598 PELP1Q8IZL8 1130 aaKnown RBP7.34□□□□□ -1.23
RNU4-17P-201ENST00000365598 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
RNU4-17P-201ENST00000365598 ASTLQ6HA08 431 aaPredicted RBP7.33□□□□□ -1.24
RNU4-17P-201ENST00000365598 OTUD5Q96G74 571 aa7.32□□□□□ -1.24
RNU4-17P-201ENST00000365598 TSPYL2Q9H2G4 693 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms