Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RN7SKP160-201ENST00000363804 340 ntBASIC7.99□□□□□ -1.13
MSH5O43196 RNU1-46P-201ENST00000384425 164 ntBASIC7.99□□□□□ -1.13
MSH5O43196 AL139095.1-201ENST00000404326 391 ntBASIC7.99□□□□□ -1.13
MSH5O43196 snoU13.3-201ENST00000459441 104 ntBASIC7.99□□□□□ -1.13
MSH5O43196 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 AC108729.3-201ENST00000513484 108 ntBASIC7.99□□□□□ -1.13
MSH5O43196 AC004812.1-201ENST00000540773 146 ntBASIC7.99□□□□□ -1.13
MSH5O43196 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 SUMO2P15-201ENST00000604285 278 ntBASIC7.99□□□□□ -1.13
MSH5O43196 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH5O43196 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.99□□□□□ -1.13
MSH5O43196 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
MSH5O43196 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
MSH5O43196 AC010266.2-201ENST00000564741 3255 ntBASIC7.98□□□□□ -1.13
MSH5O43196 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.98□□□□□ -1.13
MSH5O43196 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.98□□□□□ -1.13
MSH5O43196 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.98□□□□□ -1.13
MSH5O43196 DLEU2_6.3-201ENST00000340052 136 ntBASIC7.98□□□□□ -1.13
MSH5O43196 Y_RNA.37-201ENST00000362606 108 ntBASIC7.98□□□□□ -1.13
MSH5O43196 RNA5SP443-201ENST00000363083 132 ntBASIC7.98□□□□□ -1.13
MSH5O43196 RNU6-622P-201ENST00000384272 103 ntBASIC7.98□□□□□ -1.13
MSH5O43196 RNU6-613P-201ENST00000410412 108 ntBASIC7.98□□□□□ -1.13
MSH5O43196 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.98□□□□□ -1.13
MSH5O43196 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC7.98□□□□□ -1.13
MSH5O43196 AL627230.6-201ENST00000611129 280 ntBASIC7.98□□□□□ -1.13
MSH5O43196 MIR6793-201ENST00000612376 63 ntBASIC7.98□□□□□ -1.13
MSH5O43196 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.98□□□□□ -1.13
MSH5O43196 DLEU2_6.2-201ENST00000620994 136 ntBASIC7.98□□□□□ -1.13
MSH5O43196 AL136228.1-201ENST00000622221 319 ntBASIC7.98□□□□□ -1.13
MSH5O43196 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH5O43196 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH5O43196 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH5O43196 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH5O43196 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH5O43196 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH5O43196 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.97□□□□□ -1.13
MSH5O43196 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.97□□□□□ -1.13
MSH5O43196 Y_RNA.247-201ENST00000364500 92 ntBASIC7.97□□□□□ -1.13
MSH5O43196 RNU6-205P-201ENST00000390858 107 ntBASIC7.97□□□□□ -1.13
MSH5O43196 AC245096.1-201ENST00000413104 546 ntBASIC7.97□□□□□ -1.13
MSH5O43196 HMGN2P20-201ENST00000437531 273 ntBASIC7.97□□□□□ -1.13
MSH5O43196 SCARNA18.1-201ENST00000516330 83 ntBASIC7.97□□□□□ -1.13
MSH5O43196 RNU6-557P-201ENST00000516842 110 ntBASIC7.97□□□□□ -1.13
MSH5O43196 SNORA31.20-201ENST00000517111 133 ntBASIC7.97□□□□□ -1.13
MSH5O43196 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.97□□□□□ -1.13
MSH5O43196 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH5O43196 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
MSH5O43196 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH5O43196 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
MSH5O43196 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
MSH5O43196 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
MSH5O43196 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
MSH5O43196 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.13
MSH5O43196 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
MSH5O43196 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.96□□□□□ -1.14
MSH5O43196 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.96□□□□□ -1.14
MSH5O43196 AC090958.1-201ENST00000511122 351 ntBASIC7.96□□□□□ -1.14
MSH5O43196 RNA5SP34-201ENST00000516887 130 ntBASIC7.96□□□□□ -1.14
MSH5O43196 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.96□□□□□ -1.14
MSH5O43196 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH5O43196 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 AL033543.1-201ENST00000623440 13454 ntBASIC7.96□□□□□ -1.14
MSH5O43196 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
MSH5O43196 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH5O43196 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.96□□□□□ -1.14
MSH5O43196 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH5O43196 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH5O43196 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.95□□□□□ -1.14
MSH5O43196 MIR586-201ENST00000385035 97 ntBASIC7.95□□□□□ -1.14
MSH5O43196 SPTLC1P2-201ENST00000407089 121 ntBASIC7.95□□□□□ -1.14
MSH5O43196 ANKRD20A9P-201ENST00000457997 2978 ntBASIC7.95□□□□□ -1.14
MSH5O43196 RN7SKP66-201ENST00000516681 231 ntBASIC7.95□□□□□ -1.14
MSH5O43196 AC233702.7-202ENST00000582941 211 ntBASIC7.95□□□□□ -1.14
MSH5O43196 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH5O43196 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
MSH5O43196 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
MSH5O43196 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.95□□□□□ -1.14
MSH5O43196 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH5O43196 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
MSH5O43196 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.94□□□□□ -1.14
MSH5O43196 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
MSH5O43196 SNORD115-14-201ENST00000363090 81 ntBASIC7.94□□□□□ -1.14
MSH5O43196 U3.10-201ENST00000364459 214 ntBASIC7.94□□□□□ -1.14
MSH5O43196 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.94□□□□□ -1.14
MSH5O43196 U8.11-201ENST00000384699 133 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms