Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RNU6-700P-201ENST00000391043 107 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 PCNPP3-201ENST00000393579 471 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 ZNF299P-201ENST00000406845 1804 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 HSPE1P8-201ENST00000406997 288 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AL603910.2-201ENST00000407268 136 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 U3.42-201ENST00000408746 214 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AL360271.2-201ENST00000447710 161 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 Y_RNA.703-201ENST00000516846 111 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 TRAV32-201ENST00000553993 340 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AMZ2P1-203ENST00000565833 850 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AL158827.2-201ENST00000602494 330 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 MIR3976-201ENST00000606807 139 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 BX284668.6-201ENST00000606899 438 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 SNORD39.4-201ENST00000620099 78 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 AL691447.3-201ENST00000635020 330 ntBASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEFF1Q8IYR6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-1249P-201ENST00000363237 111 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-1155P-201ENST00000363554 107 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 Y_RNA.200-201ENST00000364018 102 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 Y_RNA.291-201ENST00000364886 113 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-48P-201ENST00000384161 107 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-378P-201ENST00000384324 107 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 Y_RNA.533-201ENST00000384596 114 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MIR578-201ENST00000384828 96 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-837P-201ENST00000391056 108 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MIR1179-201ENST00000408703 91 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 Y_RNA.592-201ENST00000410274 109 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-712P-201ENST00000410558 100 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AL139156.1-201ENST00000412785 841 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 PPP1R11P2-201ENST00000423543 382 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AL606753.1-201ENST00000427435 87 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 HMGB1P27-201ENST00000431429 603 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC090774.1-201ENST00000435925 246 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC133134.1-201ENST00000466800 359 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 UBE2DNL-203ENST00000474922 222 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 HMGN2P13-201ENST00000476476 274 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-1095P-201ENST00000516148 108 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNA5SP360-201ENST00000516555 118 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-914P-201ENST00000516749 109 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU6-1212P-201ENST00000517023 104 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RNU4-60P-201ENST00000517239 135 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 SNRPGP16-201ENST00000533275 226 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MIR3133-201ENST00000583157 78 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MIR548AC-201ENST00000585049 88 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC006557.5-201ENST00000603126 811 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 SNORD91B-202ENST00000608459 222 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC132825.6-201ENST00000638861 357 ntBASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TMEFF1Q8IYR6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 Z75746.1-201ENST00000440243 2080 ntBASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
TMEFF1Q8IYR6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms