RNA–Protein interactions for RNA: ENST00000384324.1

RNU6-378P-201, Transcript of RNA, U6 small nuclear 378, pseudogene, humanhuman

BASIC

Gene RNU6-378P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-378P-201ENST00000384324 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
RNU6-378P-201ENST00000384324 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
RNU6-378P-201ENST00000384324 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
RNU6-378P-201ENST00000384324 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
RNU6-378P-201ENST00000384324 FOXD1Q16676 465 aa15.4■□□□□ 0.06
RNU6-378P-201ENST00000384324 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
RNU6-378P-201ENST00000384324 MSH5O43196 834 aa14.4□□□□□ -0.1
RNU6-378P-201ENST00000384324 PIAS4Q8N2W9 510 aaPredicted RBP14.19□□□□□ -0.14
RNU6-378P-201ENST00000384324 PPP6R1Q9UPN7 881 aa14.15□□□□□ -0.14
RNU6-378P-201ENST00000384324 ADRA2BP18089 450 aa14.04□□□□□ -0.16
RNU6-378P-201ENST00000384324 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
RNU6-378P-201ENST00000384324 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
RNU6-378P-201ENST00000384324 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
RNU6-378P-201ENST00000384324 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
RNU6-378P-201ENST00000384324 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
RNU6-378P-201ENST00000384324 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
RNU6-378P-201ENST00000384324 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
RNU6-378P-201ENST00000384324 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
RNU6-378P-201ENST00000384324 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
RNU6-378P-201ENST00000384324 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
RNU6-378P-201ENST00000384324 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
RNU6-378P-201ENST00000384324 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
RNU6-378P-201ENST00000384324 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
RNU6-378P-201ENST00000384324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNU6-378P-201ENST00000384324 NPM3O75607 178 aaKnown RBP11.53□□□□□ -0.56
RNU6-378P-201ENST00000384324 POTEHQ6S545 545 aa11.53□□□□□ -0.56
RNU6-378P-201ENST00000384324 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
RNU6-378P-201ENST00000384324 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
RNU6-378P-201ENST00000384324 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
RNU6-378P-201ENST00000384324 DSG3P32926 999 aa11.44□□□□□ -0.58
RNU6-378P-201ENST00000384324 CAPN15O75808 1086 aa11.32□□□□□ -0.6
RNU6-378P-201ENST00000384324 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
RNU6-378P-201ENST00000384324 ABCB7O75027 752 aa11.1□□□□□ -0.63
RNU6-378P-201ENST00000384324 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
RNU6-378P-201ENST00000384324 KCNA4P22459 653 aa10.97□□□□□ -0.65
RNU6-378P-201ENST00000384324 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
RNU6-378P-201ENST00000384324 APLP2Q06481 763 aa10.85□□□□□ -0.67
RNU6-378P-201ENST00000384324 CHRDL2Q6WN34 429 aa10.8□□□□□ -0.68
RNU6-378P-201ENST00000384324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
RNU6-378P-201ENST00000384324 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
RNU6-378P-201ENST00000384324 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
RNU6-378P-201ENST00000384324 RBM42Q9BTD8 480 aaKnown RBP10.76□□□□□ -0.69
RNU6-378P-201ENST00000384324 POLA2Q14181 598 aa10.7□□□□□ -0.7
RNU6-378P-201ENST00000384324 SP7Q8TDD2 431 aaPredicted RBP10.61□□□□□ -0.71
RNU6-378P-201ENST00000384324 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
RNU6-378P-201ENST00000384324 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
RNU6-378P-201ENST00000384324 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
RNU6-378P-201ENST00000384324 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
RNU6-378P-201ENST00000384324 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
RNU6-378P-201ENST00000384324 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
RNU6-378P-201ENST00000384324 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
RNU6-378P-201ENST00000384324 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
RNU6-378P-201ENST00000384324 EVX2Q03828 476 aa10.37□□□□□ -0.75
RNU6-378P-201ENST00000384324 HAX1O00165 279 aa10.34□□□□□ -0.75
RNU6-378P-201ENST00000384324 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
RNU6-378P-201ENST00000384324 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
RNU6-378P-201ENST00000384324 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
RNU6-378P-201ENST00000384324 ZBTB22O15209 634 aa10.16□□□□□ -0.78
RNU6-378P-201ENST00000384324 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
RNU6-378P-201ENST00000384324 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
RNU6-378P-201ENST00000384324 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
RNU6-378P-201ENST00000384324 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
RNU6-378P-201ENST00000384324 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
RNU6-378P-201ENST00000384324 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
RNU6-378P-201ENST00000384324 GABBR2O75899 941 aa10□□□□□ -0.81
RNU6-378P-201ENST00000384324 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
RNU6-378P-201ENST00000384324 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
RNU6-378P-201ENST00000384324 LHX8Q68G74 356 aa9.94□□□□□ -0.82
RNU6-378P-201ENST00000384324 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
RNU6-378P-201ENST00000384324 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
RNU6-378P-201ENST00000384324 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
RNU6-378P-201ENST00000384324 FBLN2P98095 1184 aa9.91□□□□□ -0.82
RNU6-378P-201ENST00000384324 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
RNU6-378P-201ENST00000384324 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
RNU6-378P-201ENST00000384324 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
RNU6-378P-201ENST00000384324 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
RNU6-378P-201ENST00000384324 CD44P16070 742 aaKnown RBP9.71□□□□□ -0.86
RNU6-378P-201ENST00000384324 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
RNU6-378P-201ENST00000384324 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
RNU6-378P-201ENST00000384324 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
RNU6-378P-201ENST00000384324 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
RNU6-378P-201ENST00000384324 OTUD5Q96G74 571 aa9.54□□□□□ -0.88
RNU6-378P-201ENST00000384324 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
RNU6-378P-201ENST00000384324 CLCN6P51797 869 aa9.52□□□□□ -0.89
RNU6-378P-201ENST00000384324 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
RNU6-378P-201ENST00000384324 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
RNU6-378P-201ENST00000384324 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
RNU6-378P-201ENST00000384324 PELP1Q8IZL8 1130 aaKnown RBP9.44□□□□□ -0.9
RNU6-378P-201ENST00000384324 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
RNU6-378P-201ENST00000384324 POTEMA6NI47 508 aa9.38□□□□□ -0.91
RNU6-378P-201ENST00000384324 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
RNU6-378P-201ENST00000384324 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
RNU6-378P-201ENST00000384324 POTEGQ6S5H5 508 aa9.35□□□□□ -0.91
RNU6-378P-201ENST00000384324 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
RNU6-378P-201ENST00000384324 ASTLQ6HA08 431 aaPredicted RBP9.26□□□□□ -0.93
RNU6-378P-201ENST00000384324 CSRNP3Q8WYN3 585 aa9.26□□□□□ -0.93
RNU6-378P-201ENST00000384324 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
RNU6-378P-201ENST00000384324 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
RNU6-378P-201ENST00000384324 ATMINO43313 823 aaPredicted RBP9.24□□□□□ -0.93
RNU6-378P-201ENST00000384324 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms