RNA–Protein interactions for RNA: ENST00000438352.1

LINC00448-201, long intergenic non-protein coding RNA 448, humanhuman

TSL 3 BASIC

Gene LINC00448, Length 402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00448-201ENST00000438352 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
LINC00448-201ENST00000438352 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
LINC00448-201ENST00000438352 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
LINC00448-201ENST00000438352 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
LINC00448-201ENST00000438352 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
LINC00448-201ENST00000438352 FOXD1Q16676 465 aa15.24■□□□□ 0.03
LINC00448-201ENST00000438352 MSH5O43196 834 aa14.69□□□□□ -0.06
LINC00448-201ENST00000438352 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
LINC00448-201ENST00000438352 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
LINC00448-201ENST00000438352 ADRA2BP18089 450 aa13.56□□□□□ -0.24
LINC00448-201ENST00000438352 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
LINC00448-201ENST00000438352 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
LINC00448-201ENST00000438352 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
LINC00448-201ENST00000438352 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
LINC00448-201ENST00000438352 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
LINC00448-201ENST00000438352 RNF39Q9H2S5 420 aa12.38□□□□□ -0.43
LINC00448-201ENST00000438352 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
LINC00448-201ENST00000438352 C1QBPQ07021 282 aaKnown RBP12.23□□□□□ -0.45
LINC00448-201ENST00000438352 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
LINC00448-201ENST00000438352 POTEHQ6S545 545 aa12.02□□□□□ -0.49
LINC00448-201ENST00000438352 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
LINC00448-201ENST00000438352 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
LINC00448-201ENST00000438352 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
LINC00448-201ENST00000438352 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
LINC00448-201ENST00000438352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00448-201ENST00000438352 DSG3P32926 999 aa11.34□□□□□ -0.59
LINC00448-201ENST00000438352 CAPN15O75808 1086 aa11.27□□□□□ -0.61
LINC00448-201ENST00000438352 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
LINC00448-201ENST00000438352 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
LINC00448-201ENST00000438352 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
LINC00448-201ENST00000438352 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
LINC00448-201ENST00000438352 APLP2Q06481 763 aa10.96□□□□□ -0.65
LINC00448-201ENST00000438352 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
LINC00448-201ENST00000438352 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
LINC00448-201ENST00000438352 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
LINC00448-201ENST00000438352 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
LINC00448-201ENST00000438352 ABCB7O75027 752 aa10.88□□□□□ -0.67
LINC00448-201ENST00000438352 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
LINC00448-201ENST00000438352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
LINC00448-201ENST00000438352 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
LINC00448-201ENST00000438352 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
LINC00448-201ENST00000438352 HAX1O00165 279 aa10.53□□□□□ -0.72
LINC00448-201ENST00000438352 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
LINC00448-201ENST00000438352 AKT1S1Q96B36 256 aa10.5□□□□□ -0.73
LINC00448-201ENST00000438352 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
LINC00448-201ENST00000438352 POLA2Q14181 598 aa10.42□□□□□ -0.74
LINC00448-201ENST00000438352 KCNA4P22459 653 aa10.38□□□□□ -0.75
LINC00448-201ENST00000438352 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
LINC00448-201ENST00000438352 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
LINC00448-201ENST00000438352 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
LINC00448-201ENST00000438352 PITPNM1O00562 1244 aa10.23□□□□□ -0.77
LINC00448-201ENST00000438352 LHX8Q68G74 356 aa10.23□□□□□ -0.77
LINC00448-201ENST00000438352 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
LINC00448-201ENST00000438352 EVX2Q03828 476 aa10.19□□□□□ -0.78
LINC00448-201ENST00000438352 MYCNP04198 464 aaPredicted RBP10.16□□□□□ -0.78
LINC00448-201ENST00000438352 OSCARQ8IYS5 282 aa10.11□□□□□ -0.79
LINC00448-201ENST00000438352 GABBR2O75899 941 aa10.03□□□□□ -0.8
LINC00448-201ENST00000438352 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
LINC00448-201ENST00000438352 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
LINC00448-201ENST00000438352 SPDYE1Q8NFV5 336 aaPredicted RBP9.87□□□□□ -0.83
LINC00448-201ENST00000438352 SLC4A1APQ9BWU0 796 aaKnown RBP9.87□□□□□ -0.83
LINC00448-201ENST00000438352 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
LINC00448-201ENST00000438352 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
LINC00448-201ENST00000438352 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
LINC00448-201ENST00000438352 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
LINC00448-201ENST00000438352 ATF5Q9Y2D1 282 aaPredicted RBP9.82□□□□□ -0.84
LINC00448-201ENST00000438352 CLCN6P51797 869 aa9.79□□□□□ -0.84
LINC00448-201ENST00000438352 POTEIP0CG38 1075 aa9.73□□□□□ -0.85
LINC00448-201ENST00000438352 FBLN2P98095 1184 aa9.69□□□□□ -0.86
LINC00448-201ENST00000438352 DCBLD2Q96PD2 775 aa9.69□□□□□ -0.86
LINC00448-201ENST00000438352 POTEMA6NI47 508 aa9.68□□□□□ -0.86
LINC00448-201ENST00000438352 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
LINC00448-201ENST00000438352 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
LINC00448-201ENST00000438352 CHADLQ6NUI6 762 aa9.66□□□□□ -0.86
LINC00448-201ENST00000438352 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
LINC00448-201ENST00000438352 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
LINC00448-201ENST00000438352 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
LINC00448-201ENST00000438352 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
LINC00448-201ENST00000438352 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
LINC00448-201ENST00000438352 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
LINC00448-201ENST00000438352 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
LINC00448-201ENST00000438352 ZBTB22O15209 634 aa9.49□□□□□ -0.89
LINC00448-201ENST00000438352 ZNF579Q8NAF0 562 aaKnown RBP9.46□□□□□ -0.9
LINC00448-201ENST00000438352 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
LINC00448-201ENST00000438352 PABPN1Q86U42 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00448-201ENST00000438352 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
LINC00448-201ENST00000438352 POTEB2H3BUK9 544 aa9.38□□□□□ -0.91
LINC00448-201ENST00000438352 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
LINC00448-201ENST00000438352 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
LINC00448-201ENST00000438352 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
LINC00448-201ENST00000438352 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
LINC00448-201ENST00000438352 FAM163AQ96GL9 167 aaPredicted RBP9.24□□□□□ -0.93
LINC00448-201ENST00000438352 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
LINC00448-201ENST00000438352 METRNQ9UJH8 293 aa9.22□□□□□ -0.93
LINC00448-201ENST00000438352 C7P10643 843 aa9.21□□□□□ -0.94
LINC00448-201ENST00000438352 SLC39A7Q92504 469 aa9.21□□□□□ -0.94
LINC00448-201ENST00000438352 EHMT2Q96KQ7 1210 aa9.21□□□□□ -0.94
LINC00448-201ENST00000438352 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
LINC00448-201ENST00000438352 PELP1Q8IZL8 1130 aaKnown RBP9.17□□□□□ -0.94
LINC00448-201ENST00000438352 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms