Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 SMG1P1-202ENST00000309865 4223 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SNORA70I-201ENST00000384544 135 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR188-201ENST00000385034 86 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR1250-201ENST00000408098 113 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 U3.31-201ENST00000408113 216 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC016397.1-201ENST00000412463 242 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RPL27AP8-201ENST00000424277 446 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC099782.1-201ENST00000425889 474 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RPL7AP49-201ENST00000429522 581 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AL591438.1-201ENST00000433508 581 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AL357552.1-201ENST00000445254 415 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RNA5SP34-201ENST00000516887 130 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RN7SKP277-201ENST00000516895 283 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC092490.3-201ENST00000545370 572 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR3921-201ENST00000577308 85 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR4491-201ENST00000581087 68 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR4470-201ENST00000583453 72 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC012493.2-201ENST00000595083 291 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC091133.5-201ENST00000603088 301 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RN7SL787P-201ENST00000613000 284 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIAT_exon1.1-201ENST00000617016 135 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MIR6079-201ENST00000635807 62 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AP000542.3-201ENST00000623391 6114 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC006058.1-201ENST00000568686 5067 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC025031.4-201ENST00000621248 3271 ntBASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP4-9Q9BYQ8 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 DHX9P1-201ENST00000436565 3076 ntBASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 MAPK10-377ENST00000642006 2752 ntBASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 HLF-210ENST00000575345 3589 ntTSL 2 BASIC2.31□□□□□ -2.04
KRTAP4-9Q9BYQ8 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms