Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
PRIM1P49642 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
PRIM1P49642 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.04□□□□□ -1.44
PRIM1P49642 RNU6-222P-201ENST00000362438 107 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 RN7SKP280-201ENST00000364196 304 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 RNU6-336P-201ENST00000364891 107 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC6.04□□□□□ -1.44
PRIM1P49642 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.04□□□□□ -1.44
PRIM1P49642 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 TDGF1P1-201ENST00000445734 527 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 UQCRBP2-201ENST00000447827 297 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 RPL23AP75-201ENST00000491601 451 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 RN7SL810P-201ENST00000493031 276 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.04□□□□□ -1.44
PRIM1P49642 MIR2116-201ENST00000517221 80 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 AL353748.2-201ENST00000622148 471 ntBASIC6.04□□□□□ -1.44
PRIM1P49642 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PRIM1P49642 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.04□□□□□ -1.44
PRIM1P49642 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PRIM1P49642 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.04□□□□□ -1.44
PRIM1P49642 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
PRIM1P49642 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.03□□□□□ -1.44
PRIM1P49642 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 DEFB108F-201ENST00000344638 222 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 RNU6-249P-201ENST00000363016 102 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 Y_RNA.245-201ENST00000364493 95 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.03□□□□□ -1.44
PRIM1P49642 MIR514A1-201ENST00000385133 98 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 SNORA40C-201ENST00000391285 128 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 Y_RNA.597-201ENST00000410463 100 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.03□□□□□ -1.44
PRIM1P49642 ZFRP1-201ENST00000457579 2970 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 SCARNA10-201ENST00000459255 330 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 SNORA40.9-201ENST00000515895 93 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 SNORD116-26-201ENST00000516006 96 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.03□□□□□ -1.44
PRIM1P49642 MIR4429-201ENST00000580105 73 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 RN7SL435P-201ENST00000584418 282 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 IPO5P1-202ENST00000600039 287 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 RPL7P50-201ENST00000600588 727 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 AC091979.2-201ENST00000607514 214 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 AC006001.4-201ENST00000622243 395 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 IGHVIII-44-202ENST00000636235 289 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PRIM1P49642 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 AL365440.1-201ENST00000436135 2167 ntBASIC6.03□□□□□ -1.44
PRIM1P49642 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PRIM1P49642 AC018529.3-201ENST00000624212 2254 ntBASIC6.02□□□□□ -1.44
PRIM1P49642 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
PRIM1P49642 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 AL359693.1-201ENST00000614959 2407 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 Y_RNA.586-201ENST00000391146 98 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 RPS26P8-201ENST00000393490 348 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 UBA52P6-201ENST00000399822 382 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 AC007738.1-201ENST00000413892 348 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 OOSP1P1-201ENST00000423265 274 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC6.02□□□□□ -1.45
PRIM1P49642 AC096638.1-201ENST00000444678 216 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.02□□□□□ -1.45
PRIM1P49642 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.02□□□□□ -1.45
PRIM1P49642 RPL31P13-201ENST00000484151 370 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 RNU6-1198P-201ENST00000516904 67 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.02□□□□□ -1.45
PRIM1P49642 AC010928.2-201ENST00000588017 287 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 AL133393.1-201ENST00000603277 287 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 AC015914.2-201ENST00000618167 288 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.02□□□□□ -1.45
PRIM1P49642 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
PRIM1P49642 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.02□□□□□ -1.45
PRIM1P49642 AC007390.2-201ENST00000606229 3803 ntBASIC6.02□□□□□ -1.45
PRIM1P49642 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PRIM1P49642 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.01□□□□□ -1.45
PRIM1P49642 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.01□□□□□ -1.45
PRIM1P49642 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PRIM1P49642 Y_RNA.357-201ENST00000365487 109 ntBASIC6.01□□□□□ -1.45
PRIM1P49642 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.01□□□□□ -1.45
PRIM1P49642 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms