RNA–Protein interactions for RNA: ENST00000516904.1

RNU6-1198P-201, Transcript of RNA, U6 small nuclear 1198, pseudogene, humanhuman

BASIC

Gene RNU6-1198P, Length 67 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1198P-201ENST00000516904 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.25
RNU6-1198P-201ENST00000516904 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
RNU6-1198P-201ENST00000516904 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
RNU6-1198P-201ENST00000516904 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
RNU6-1198P-201ENST00000516904 FOXD1Q16676 465 aa10.59□□□□□ -0.71
RNU6-1198P-201ENST00000516904 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.73
RNU6-1198P-201ENST00000516904 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
RNU6-1198P-201ENST00000516904 ADRA2BP18089 450 aa10.21□□□□□ -0.77
RNU6-1198P-201ENST00000516904 PIAS4Q8N2W9 510 aaPredicted RBP9.85□□□□□ -0.83
RNU6-1198P-201ENST00000516904 MSH5O43196 834 aa9.56□□□□□ -0.88
RNU6-1198P-201ENST00000516904 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
RNU6-1198P-201ENST00000516904 MAPK8IP2Q13387 824 aaPredicted RBP9.31□□□□□ -0.92
RNU6-1198P-201ENST00000516904 KCNA4P22459 653 aa9.21□□□□□ -0.94
RNU6-1198P-201ENST00000516904 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
RNU6-1198P-201ENST00000516904 CNKSR2Q8WXI2 1034 aa9.03□□□□□ -0.96
RNU6-1198P-201ENST00000516904 DMRT2Q9Y5R5 561 aa9.03□□□□□ -0.96
RNU6-1198P-201ENST00000516904 NPM3O75607 178 aaKnown RBP9.01□□□□□ -0.97
RNU6-1198P-201ENST00000516904 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
RNU6-1198P-201ENST00000516904 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1198P-201ENST00000516904 RNF216Q9NWF9 866 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1198P-201ENST00000516904 POTEDQ86YR6 584 aa8.84□□□□□ -0.99
RNU6-1198P-201ENST00000516904 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
RNU6-1198P-201ENST00000516904 SLC4A1APQ9BWU0 796 aaKnown RBP8.66□□□□□ -1.02
RNU6-1198P-201ENST00000516904 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
RNU6-1198P-201ENST00000516904 ZBTB22O15209 634 aa8.56□□□□□ -1.04
RNU6-1198P-201ENST00000516904 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
RNU6-1198P-201ENST00000516904 CSRNP3Q8WYN3 585 aa8.47□□□□□ -1.05
RNU6-1198P-201ENST00000516904 EHMT2Q96KQ7 1210 aa8.45□□□□□ -1.06
RNU6-1198P-201ENST00000516904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNU6-1198P-201ENST00000516904 FOXD4L1Q9NU39 408 aa8.35□□□□□ -1.07
RNU6-1198P-201ENST00000516904 U3KPZ7 1027 aaPredicted RBP8.34□□□□□ -1.07
RNU6-1198P-201ENST00000516904 RNF39Q9H2S5 420 aa8.31□□□□□ -1.08
RNU6-1198P-201ENST00000516904 ATF5Q9Y2D1 282 aaPredicted RBP8.21□□□□□ -1.1
RNU6-1198P-201ENST00000516904 MYCNP04198 464 aaPredicted RBP8.2□□□□□ -1.1
RNU6-1198P-201ENST00000516904 SPINK5Q9NQ38 1064 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1198P-201ENST00000516904 C1QBPQ07021 282 aaKnown RBP8.13□□□□□ -1.11
RNU6-1198P-201ENST00000516904 ATXN8OSP0DMR3 200 aa8.04□□□□□ -1.12
RNU6-1198P-201ENST00000516904 SAMD1Q6SPF0 538 aaPredicted RBP8.03□□□□□ -1.12
RNU6-1198P-201ENST00000516904 CACNB1Q02641 598 aaPredicted RBP8.01□□□□□ -1.13
RNU6-1198P-201ENST00000516904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8□□□□□ -1.13
RNU6-1198P-201ENST00000516904 HNRNPUL2Q1KMD3 747 aaKnown RBP8□□□□□ -1.13
RNU6-1198P-201ENST00000516904 CAPN15O75808 1086 aa7.96□□□□□ -1.14
RNU6-1198P-201ENST00000516904 TRHP20396 242 aaPredicted RBP7.95□□□□□ -1.14
RNU6-1198P-201ENST00000516904 DSG3P32926 999 aa7.93□□□□□ -1.14
RNU6-1198P-201ENST00000516904 ZNF219Q9P2Y4 722 aaPredicted RBP7.92□□□□□ -1.14
RNU6-1198P-201ENST00000516904 ABCB7O75027 752 aa7.89□□□□□ -1.15
RNU6-1198P-201ENST00000516904 POLA2Q14181 598 aa7.87□□□□□ -1.15
RNU6-1198P-201ENST00000516904 APLP2Q06481 763 aa7.85□□□□□ -1.15
RNU6-1198P-201ENST00000516904 MKRN4PQ13434 485 aaPredicted RBP7.82□□□□□ -1.16
RNU6-1198P-201ENST00000516904 OSCARQ8IYS5 282 aa7.59□□□□□ -1.19
RNU6-1198P-201ENST00000516904 FBLN2P98095 1184 aa7.57□□□□□ -1.2
RNU6-1198P-201ENST00000516904 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
RNU6-1198P-201ENST00000516904 FKBP8Q14318 412 aa7.54□□□□□ -1.2
RNU6-1198P-201ENST00000516904 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
RNU6-1198P-201ENST00000516904 PROM2Q8N271 834 aa7.49□□□□□ -1.21
RNU6-1198P-201ENST00000516904 SSUH2Q9Y2M2 353 aa7.49□□□□□ -1.21
RNU6-1198P-201ENST00000516904 SPDYE2BA6NHP3 402 aa7.46□□□□□ -1.22
RNU6-1198P-201ENST00000516904 SPDYE6P0CI01 402 aa7.46□□□□□ -1.22
RNU6-1198P-201ENST00000516904 SPDYE2Q495Y8 402 aa7.46□□□□□ -1.22
RNU6-1198P-201ENST00000516904 ZNF692Q9BU19 519 aaPredicted RBP7.45□□□□□ -1.22
RNU6-1198P-201ENST00000516904 PABPN1Q86U42 306 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNU6-1198P-201ENST00000516904 REM2Q8IYK8 340 aaPredicted RBP7.37□□□□□ -1.23
RNU6-1198P-201ENST00000516904 AKT1S1Q96B36 256 aa7.37□□□□□ -1.23
RNU6-1198P-201ENST00000516904 RBM42Q9BTD8 480 aaKnown RBP7.36□□□□□ -1.23
RNU6-1198P-201ENST00000516904 PITPNM1O00562 1244 aa7.29□□□□□ -1.24
RNU6-1198P-201ENST00000516904 SPDYE1Q8NFV5 336 aaPredicted RBP7.2□□□□□ -1.26
RNU6-1198P-201ENST00000516904 CLEC11AQ9Y240 323 aa7.2□□□□□ -1.26
RNU6-1198P-201ENST00000516904 CHRDL2Q6WN34 429 aa7.17□□□□□ -1.26
RNU6-1198P-201ENST00000516904 CREBZFQ9NS37 354 aa7.17□□□□□ -1.26
RNU6-1198P-201ENST00000516904 MNX1P50219 401 aaPredicted RBP7.16□□□□□ -1.26
RNU6-1198P-201ENST00000516904 FXR2P51116 673 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNU6-1198P-201ENST00000516904 VASPP50552 380 aaPredicted RBP7.15□□□□□ -1.26
RNU6-1198P-201ENST00000516904 IFNLR1Q8IU57 520 aaPredicted RBP7.15□□□□□ -1.26
RNU6-1198P-201ENST00000516904 STAG3Q9UJ98 1225 aa7.15□□□□□ -1.26
RNU6-1198P-201ENST00000516904 CHADLQ6NUI6 762 aa7.14□□□□□ -1.27
RNU6-1198P-201ENST00000516904 PIP4P2Q8N4L2 257 aa7.14□□□□□ -1.27
RNU6-1198P-201ENST00000516904 PRR29P0C7W0 189 aa7.13□□□□□ -1.27
RNU6-1198P-201ENST00000516904 FBXO3Q9UK99 471 aa7.13□□□□□ -1.27
RNU6-1198P-201ENST00000516904 MIER1Q8N108 512 aa7.09□□□□□ -1.27
RNU6-1198P-201ENST00000516904 PRKAR2AP13861 404 aaKnown RBP7.06□□□□□ -1.28
RNU6-1198P-201ENST00000516904 NUBP1P53384 320 aa7.02□□□□□ -1.29
RNU6-1198P-201ENST00000516904 PLCD3Q8N3E9 789 aa7.02□□□□□ -1.29
RNU6-1198P-201ENST00000516904 FARP1Q9Y4F1 1045 aaPredicted RBP7.01□□□□□ -1.29
RNU6-1198P-201ENST00000516904 EVX2Q03828 476 aa6.99□□□□□ -1.29
RNU6-1198P-201ENST00000516904 RASEFQ8IZ41 740 aa6.97□□□□□ -1.29
RNU6-1198P-201ENST00000516904 POTEHQ6S545 545 aa6.95□□□□□ -1.3
RNU6-1198P-201ENST00000516904 KLHL34Q8N239 644 aa6.95□□□□□ -1.3
RNU6-1198P-201ENST00000516904 SPOCK2Q92563 424 aa6.94□□□□□ -1.3
RNU6-1198P-201ENST00000516904 RTN4Q9NQC3 1192 aaKnown RBP6.94□□□□□ -1.3
RNU6-1198P-201ENST00000516904 PKD2Q13563 968 aa6.93□□□□□ -1.3
RNU6-1198P-201ENST00000516904 C19orf67A6NJJ6 358 aa6.91□□□□□ -1.3
RNU6-1198P-201ENST00000516904 NPM1P06748 294 aaKnown RBP eCLIP6.86□□□□□ -1.31
RNU6-1198P-201ENST00000516904 TSPYL2Q9H2G4 693 aaPredicted RBP6.86□□□□□ -1.31
RNU6-1198P-201ENST00000516904 CCDC61Q9Y6R9 512 aa6.86□□□□□ -1.31
RNU6-1198P-201ENST00000516904 PLEKHG5O94827 1062 aa6.85□□□□□ -1.31
RNU6-1198P-201ENST00000516904 ZBTB47Q9UFB7 747 aaPredicted RBP6.85□□□□□ -1.31
RNU6-1198P-201ENST00000516904 DCAF8Q5TAQ9 597 aa6.84□□□□□ -1.31
RNU6-1198P-201ENST00000516904 CD44P16070 742 aaKnown RBP6.83□□□□□ -1.32
RNU6-1198P-201ENST00000516904 HAX1O00165 279 aa6.82□□□□□ -1.32
RNU6-1198P-201ENST00000516904 RNF25Q96BH1 459 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms