Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 Y_RNA.689-201ENST00000516589 107 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD12P35452 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXD12P35452 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD12P35452 BNIP3P6-201ENST00000549284 499 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AMZ2P1-203ENST00000565833 850 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC091135.1-201ENST00000585943 307 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC002545.1-201ENST00000592511 181 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC174048.1-201ENST00000603389 144 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 RNU6-89P-201ENST00000606519 100 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC012409.4-201ENST00000612923 249 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 AC073308.1-201ENST00000623696 305 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXD12P35452 AC007656.2-201ENST00000624902 4547 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD12P35452 MFSD8-233ENST00000641482 4860 ntBASIC3.52□□□□□ -1.85
HOXD12P35452 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 CEP170P1-201ENST00000502249 4587 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HOXD12P35452 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXD12P35452 RNU6-288P-201ENST00000363690 104 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HOXD12P35452 RNU6-116P-201ENST00000384042 109 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 SNORA48.5-201ENST00000391143 135 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD12P35452 EEF1A1P40-201ENST00000412883 573 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 CALM2P2-201ENST00000428512 440 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD12P35452 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
HOXD12P35452 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD12P35452 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 ELOCP23-201ENST00000452014 332 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 MTND1P11-201ENST00000456661 876 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
HOXD12P35452 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD12P35452 AC091885.1-201ENST00000506658 268 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC117522.3-201ENST00000507974 584 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC098591.2-201ENST00000510152 315 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 RN7SKP83-201ENST00000516512 178 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 MTND4P7-201ENST00000523876 130 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.51□□□□□ -1.85
HOXD12P35452 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD12P35452 AC078814.3-201ENST00000553036 491 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXD12P35452 FGF7P1-201ENST00000582820 288 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 MIR4424-201ENST00000585257 86 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC004852.3-201ENST00000614131 326 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC090617.10-201ENST00000624308 134 ntBASIC3.51□□□□□ -1.85
HOXD12P35452 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXD12P35452 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
HOXD12P35452 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD12P35452 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD12P35452 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD12P35452 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-845P-201ENST00000362578 103 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 SNORA32.2-201ENST00000384049 122 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-198P-201ENST00000384258 104 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MIR514A2-201ENST00000385131 88 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MIR514A3-201ENST00000385132 88 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 SNORD17-201ENST00000390930 237 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-550P-201ENST00000391057 101 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 U3.26-201ENST00000391236 204 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD12P35452 RNU4-46P-201ENST00000410818 138 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU2-41P-201ENST00000410991 178 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNA5SP111-201ENST00000411386 101 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AL513331.1-201ENST00000411908 397 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC092809.3-201ENST00000415453 231 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC009161.1-201ENST00000417306 376 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AL451054.2-201ENST00000420896 202 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MTND3P23-201ENST00000431980 347 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 Z82210.1-201ENST00000440037 231 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-953P-201ENST00000459154 107 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 snoU13.28-201ENST00000459235 104 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RPS20P22-201ENST00000473700 357 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RPL23AP11-201ENST00000475260 469 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC110794.1-201ENST00000505816 425 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXD12P35452 RN7SKP209-201ENST00000516888 304 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-677P-201ENST00000516914 101 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 RNU6-685P-201ENST00000517088 95 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.5□□□□□ -1.85
HOXD12P35452 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXD12P35452 TRAV28-201ENST00000557548 323 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MIR5004-201ENST00000579078 107 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 uc_338.34-201ENST00000617467 174 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 MTND5P42-201ENST00000637720 498 ntBASIC3.5□□□□□ -1.85
HOXD12P35452 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD12P35452 AC103710.2-202ENST00000641454 2853 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms