RNA–Protein interactions for RNA: ENST00000443200.1

TRAPPC2P3-201, Transcript of trafficking protein particle complex 2 pseudogene 3, humanhuman

BASIC

Gene TRAPPC2P3, Length 321 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2P3-201ENST00000443200 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC2P3-201ENST00000443200 CHIC1Q5VXU3 224 aa17.71■□□□□ 0.43
TRAPPC2P3-201ENST00000443200 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC2P3-201ENST00000443200 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC2P3-201ENST00000443200 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
TRAPPC2P3-201ENST00000443200 FOXD1Q16676 465 aa14.66□□□□□ -0.06
TRAPPC2P3-201ENST00000443200 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
TRAPPC2P3-201ENST00000443200 MSH5O43196 834 aa14.19□□□□□ -0.14
TRAPPC2P3-201ENST00000443200 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
TRAPPC2P3-201ENST00000443200 ADRA2BP18089 450 aa13.86□□□□□ -0.19
TRAPPC2P3-201ENST00000443200 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC2P3-201ENST00000443200 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC2P3-201ENST00000443200 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
TRAPPC2P3-201ENST00000443200 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC2P3-201ENST00000443200 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
TRAPPC2P3-201ENST00000443200 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
TRAPPC2P3-201ENST00000443200 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
TRAPPC2P3-201ENST00000443200 KCNA4P22459 653 aa12.26□□□□□ -0.45
TRAPPC2P3-201ENST00000443200 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
TRAPPC2P3-201ENST00000443200 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
TRAPPC2P3-201ENST00000443200 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC2P3-201ENST00000443200 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC2P3-201ENST00000443200 POTEHQ6S545 545 aa11.96□□□□□ -0.49
TRAPPC2P3-201ENST00000443200 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
TRAPPC2P3-201ENST00000443200 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
TRAPPC2P3-201ENST00000443200 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
TRAPPC2P3-201ENST00000443200 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
TRAPPC2P3-201ENST00000443200 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
TRAPPC2P3-201ENST00000443200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAPPC2P3-201ENST00000443200 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
TRAPPC2P3-201ENST00000443200 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC2P3-201ENST00000443200 ZBTB22O15209 634 aa11.28□□□□□ -0.6
TRAPPC2P3-201ENST00000443200 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
TRAPPC2P3-201ENST00000443200 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
TRAPPC2P3-201ENST00000443200 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC2P3-201ENST00000443200 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
TRAPPC2P3-201ENST00000443200 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2P3-201ENST00000443200 CAPN15O75808 1086 aa11.03□□□□□ -0.64
TRAPPC2P3-201ENST00000443200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC2P3-201ENST00000443200 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
TRAPPC2P3-201ENST00000443200 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC2P3-201ENST00000443200 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC2P3-201ENST00000443200 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC2P3-201ENST00000443200 APLP2Q06481 763 aa10.91□□□□□ -0.66
TRAPPC2P3-201ENST00000443200 DSG3P32926 999 aa10.85□□□□□ -0.67
TRAPPC2P3-201ENST00000443200 ABCB7O75027 752 aa10.84□□□□□ -0.67
TRAPPC2P3-201ENST00000443200 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC2P3-201ENST00000443200 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
TRAPPC2P3-201ENST00000443200 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC2P3-201ENST00000443200 POLA2Q14181 598 aa10.74□□□□□ -0.69
TRAPPC2P3-201ENST00000443200 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
TRAPPC2P3-201ENST00000443200 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
TRAPPC2P3-201ENST00000443200 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC2P3-201ENST00000443200 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC2P3-201ENST00000443200 FBLN2P98095 1184 aa10.39□□□□□ -0.75
TRAPPC2P3-201ENST00000443200 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
TRAPPC2P3-201ENST00000443200 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
TRAPPC2P3-201ENST00000443200 HAX1O00165 279 aa10.24□□□□□ -0.77
TRAPPC2P3-201ENST00000443200 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC2P3-201ENST00000443200 SPDYE2BA6NHP3 402 aa10.17□□□□□ -0.78
TRAPPC2P3-201ENST00000443200 SPDYE6P0CI01 402 aa10.17□□□□□ -0.78
TRAPPC2P3-201ENST00000443200 SPDYE2Q495Y8 402 aa10.17□□□□□ -0.78
TRAPPC2P3-201ENST00000443200 AKT1S1Q96B36 256 aa10.13□□□□□ -0.79
TRAPPC2P3-201ENST00000443200 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
TRAPPC2P3-201ENST00000443200 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
TRAPPC2P3-201ENST00000443200 SSUH2Q9Y2M2 353 aa10.09□□□□□ -0.79
TRAPPC2P3-201ENST00000443200 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC2P3-201ENST00000443200 LHX8Q68G74 356 aa10.07□□□□□ -0.8
TRAPPC2P3-201ENST00000443200 FKBP8Q14318 412 aa10.06□□□□□ -0.8
TRAPPC2P3-201ENST00000443200 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAPPC2P3-201ENST00000443200 CLEC11AQ9Y240 323 aa9.98□□□□□ -0.81
TRAPPC2P3-201ENST00000443200 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
TRAPPC2P3-201ENST00000443200 EVX2Q03828 476 aa9.92□□□□□ -0.82
TRAPPC2P3-201ENST00000443200 SPDYE1Q8NFV5 336 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC2P3-201ENST00000443200 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRAPPC2P3-201ENST00000443200 PROM2Q8N271 834 aa9.87□□□□□ -0.83
TRAPPC2P3-201ENST00000443200 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
TRAPPC2P3-201ENST00000443200 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
TRAPPC2P3-201ENST00000443200 CHADLQ6NUI6 762 aa9.77□□□□□ -0.85
TRAPPC2P3-201ENST00000443200 PRKAR2AP13861 404 aaKnown RBP9.73□□□□□ -0.85
TRAPPC2P3-201ENST00000443200 GABBR2O75899 941 aa9.71□□□□□ -0.86
TRAPPC2P3-201ENST00000443200 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
TRAPPC2P3-201ENST00000443200 MIER1Q8N108 512 aa9.65□□□□□ -0.86
TRAPPC2P3-201ENST00000443200 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
TRAPPC2P3-201ENST00000443200 C19orf67A6NJJ6 358 aa9.6□□□□□ -0.87
TRAPPC2P3-201ENST00000443200 PLCD3Q8N3E9 789 aa9.59□□□□□ -0.87
TRAPPC2P3-201ENST00000443200 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC2P3-201ENST00000443200 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC2P3-201ENST00000443200 VASPP50552 380 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC2P3-201ENST00000443200 POTEMA6NI47 508 aa9.54□□□□□ -0.88
TRAPPC2P3-201ENST00000443200 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
TRAPPC2P3-201ENST00000443200 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
TRAPPC2P3-201ENST00000443200 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
TRAPPC2P3-201ENST00000443200 IFNLR1Q8IU57 520 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC2P3-201ENST00000443200 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
TRAPPC2P3-201ENST00000443200 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRAPPC2P3-201ENST00000443200 POTEIP0CG38 1075 aa9.44□□□□□ -0.9
TRAPPC2P3-201ENST00000443200 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2P3-201ENST00000443200 TSPYL2Q9H2G4 693 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC2P3-201ENST00000443200 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms