Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 Z85996.1-201ENST00000494644 937 ntBASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 AC011298.2-201ENST00000617989 482 ntBASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 AP000974.1-201ENST00000623909 2387 ntBASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCA3PQ9Y6N3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 UNC93B2-201ENST00000285383 730 ntBASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCA3PQ9Y6N3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 AC011506.1-201ENST00000474329 610 ntBASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 AL355075.4-201ENST00000554988 638 ntBASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 AC130371.2-201ENST00000619443 611 ntBASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCA3PQ9Y6N3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCA3PQ9Y6N3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCA3PQ9Y6N3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCA3PQ9Y6N3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCA3PQ9Y6N3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms