Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 IER3-202ENST00000376377 1350 ntBASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.67■□□□□ 0.58
HS3ST3A1Q9Y663 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 AC116407.4-201ENST00000623319 1061 ntBASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 AC005332.1-201ENST00000577698 1310 ntBASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 TEX21P-204ENST00000641479 1693 ntBASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HS3ST3A1Q9Y663 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 AC125437.2-201ENST00000625180 2167 ntBASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 AC034232.1-201ENST00000506026 1064 ntBASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 ZNF444P1-201ENST00000559497 298 ntBASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HS3ST3A1Q9Y663 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 LINC01311-201ENST00000565162 1445 ntBASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HS3ST3A1Q9Y663 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HS3ST3A1Q9Y663 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms